Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq19 102 8e-17 seq228 98.7 1e-15 seq65 95.1 1e-14 seq126 89.7 5e-13 seq127 82.4 8e-11 >seq19 Length=23049436 Score = 102 bits (112), Expect = 8e-17 Identities = 160/226 (71%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGC---GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGT 134551 |||| |||||| || || || ||||| |||||||||||| ||||||| | ||| || Sbjct 10825095 AGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAA-AGT 10825153 Query 134552 GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCC 134611 ||| || || || || ||| | ||||| || | | |||||||| || || || || Sbjct 10825154 GTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCC 10825213 Query 134612 TTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAG 134671 ||| || || || || || || || || | ||| || || | ||| || ||||| Sbjct 10825214 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAG 10825273 Query 134672 AGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||| ||||| || || || | |||||| | |||||| ||||| ||| Sbjct 10825274 AGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTTG 10825319 >seq228 Length=1351672 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| | ||| || |||||||| || |||||||||||||| | ||| || || || Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTC 29232 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||||||| |||||||||| ||||||||| || | | | ||||| || || ||||| Sbjct 29233 AAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTG 29292 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||||| |||||| || | ||||| | || || || || || || || || Sbjct 29293 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTT 29352 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || || | || || || || || ||||||| Sbjct 29353 GCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq65 Length=8612916 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| | ||| || ||||| || || ||||| |||||||| | ||| | || || Sbjct 6272650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTC 6272591 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||||||||| |||||||||| |||||||| || ||||| ||||| || ||||| Sbjct 6272590 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 6272531 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||||| |||||| || ||||| | ||| || ||||| || ||||| || Sbjct 6272530 GATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 6272471 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 6272470 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq126 Length=3816233 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | |||| || ||||| || ||||| || || ||||||||||||||| Sbjct 216263 CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGG-- 216206 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 || | | | || || || ||||| || ||||| |||| | || ||| || || || Sbjct 216205 ACAGGGAGCCCATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGGG 216146 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| |||||||| || ||||| | | ||||| | || || Sbjct 216145 ATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAACC 216086 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | ||| || ||||| |||| || ||||| || || || || Sbjct 216085 TTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGAT 216045 >seq127 Length=3912380 Score = 82.4 bits (90), Expect = 8e-11 Identities = 152/222 (68%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| |||||| || || || ||||| |||||||||||||||||||| | || || Sbjct 1384004 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTATGT 1384063 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || || || ||| | | ||| |||| | |||||||| || || || ||||| Sbjct 1384064 CTGTCTTCCAGTTGCTTGACAG-AAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1384122 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || | || || || || | | ||| || | | | | || | |||||| Sbjct 1384123 TTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAACCTTGAGAGTG 1384182 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | ||||| || ||||| ||||| ||| Sbjct 1384183 ATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTTG 1384224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505355510628280