Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq67 228 1e-54 seq57 127 3e-24 seq48 107 3e-18 seq7 96.9 5e-15 seq22 95.1 2e-14 seq54 86.0 9e-12 >seq67 Length=8586409 Score = 228 bits (252), Expect = 1e-54 Identities = 320/446 (72%), Gaps = 6/446 (1%) Strand=Plus/Plus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 ||||| |||| || |||||| |||| ||| || | |||| |||||| || || | |||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || || |||||||| |||||||| || || | || |||||||| ||||| |||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 39722 GATCCAGAAAAGAAGATGCCTT-CTACTGCTGCAAATGCAACAAGTCTCTCTCC----GT 39776 || |||||||||||||| |||| | ||||| ||||| || |||| || ||||| || Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 39777 AACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA 39836 || | | | | | ||||| | | ||||| || || ||| |||| ||||||||| Sbjct 7039235 GACCTCT-TGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCA 7039293 Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896 | || || | ||||| || ||| ||| |||| | |||||||| || || || | Sbjct 7039294 TGGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAA 7039353 Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 | | |||||||||||||| ||||| |||| ||| || | || || || | ||| || | Sbjct 7039354 TGAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATC 7039413 Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016 | | ||||| | || || || ||| | || | ||| |||| |||||||| |||| Sbjct 7039414 AGCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTA 7039473 Query 40017 TTCCATCACTAGCGGCAAAAAATGCC 40042 | ||||| || || ||||| || ||| Sbjct 7039474 TGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || |||||||||||||| || || |||||||| ||||| | || Sbjct 65923 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 65982 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||||||| |||||||| || ||||| ||||| || || | | |||||| Sbjct 65983 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 66042 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 66043 TTTCTTATACCAT 66055 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| |||| ||| |||||||| ||||| || || || | || || || ||||| | Sbjct 95333 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 95392 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 |||| ||||||||||| || | ||||| | || || ||| |||| ||||| || |||| Sbjct 95393 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 95452 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| || || || |||||||||| Sbjct 95453 CTAGTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCATGG 95503 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 80780 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 80839 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| |||||||| | || || ||||||| || Sbjct 80840 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 80899 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCG 69743 || || || || || | |||| ||||| Sbjct 80900 TCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 >seq48 Length=11824846 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||||||||| ||||| | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 | ||| ||||| |||||||| ||||| || ||||| || |||||||| || ||||| || Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 3086635 Query 39761 AC 39762 || Sbjct 3086634 AC 3086633 Score = 86.0 bits (94), Expect = 9e-12 Identities = 93/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 39987 AAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATA 40046 |||||||| || || ||||||||||| ||||||||||| || |||||||| ||||| | Sbjct 3080023 AAAATCTTACC---AAGTTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAAGA 3079967 Query 40047 CATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTG 40106 | || |||||||| || ||||| ||| | | || | ||||| || ||| |||| Sbjct 3079966 CGTGGGAGATAAAATACTTCTCATCTGGTTTAAGCTTGTGCCAGTGCGGGAGATCCTTTG 3079907 Query 40107 ATA 40109 ||| Sbjct 3079906 ATA 3079904 >seq7 Length=35612534 Score = 96.9 bits (106), Expect = 5e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||||| || || ||||| || ||||| || || ||||| | Sbjct 33433146 CCTCATCTCTGCTAATGAGCTCGTTGGAGAACGTGAGGCCCGGCATCAGGCCTCGCTTCT 33433205 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| || |||| || || || || || ||||||||||| || || || || || | Sbjct 33433206 TGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAACG 33433265 Query 39759 CAACAAGTCTCTCTCC 39774 | || | | |||||| Sbjct 33433266 CCACGACGCGCTCTCC 33433281 >seq22 Length=20942318 Score = 95.1 bits (104), Expect = 2e-14 Identities = 169/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 37359 AAACC-CTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTCAGATCAGGAT 37417 ||||| | ||||| ||| | ||| |||| | | ||| ||||| | | || |||| Sbjct 6678816 AAACCTCCTGAGCCCCTTTCAGTGT--CATCCAAAACTTGAACTTCCTCTATTTCTGGAT 6678759 Query 37418 AATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATTTTAAAATTAC 37477 || | || ||| ||| || ||| | || |||| || ||| | |||| || ||| || Sbjct 6678758 AAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTCTCCCTTTTTTACTTCAAATTTTT 6678699 Query 37478 ATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCATCGATTACTC 37537 ||| ||| ||| | ||| | || |||| ||| || |||||||||||||| || || | Sbjct 6678698 CTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCTTCATCTATAACAC 6678639 Query 37538 CGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGATCTAGGAGCTATTCTTCCAT 37594 | |||||||||| ||| || | || | |||| || | ||||||| |||||||| Sbjct 6678638 CAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACCGGAACGTGGAGCTACTCTTCCAT 6678579 Query 37595 AACA 37598 | || Sbjct 6678578 AGCA 6678575 >seq54 Length=10138281 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 37347 TCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCA 37404 ||| || || ||||| ||| ||||| ||| | ||| |||| | | ||| | ||| Sbjct 890008 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTCAGTGT--CATCCAAAACTTGAATTTCC 890065 Query 37405 TTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTT 37464 | | || |||||| | || |||| | | || ||||| || ||| || ||| | ||| Sbjct 890066 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTTGGTCACCCTTTTTT 890125 Query 37465 ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCT 37524 | || ||| || ||| ||| ||| | ||| | || |||| ||| || ||||||||| Sbjct 890126 ACTTCAAATTTTTTTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCT 890185 Query 37525 TCATCGATTACTCCGCCTCCTACATCAATA 37554 ||||| || || || |||||||||| ||| Sbjct 890186 TCATCTATAACACCAGCTCCTACATCTATA 890215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686850507201960