Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq67 143 2e-29 seq48 111 1e-19 seq54 82.4 6e-11 >seq67 Length=8586409 Score = 143 bits (158), Expect = 2e-29 Identities = 297/433 (69%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 43855 GGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG-GTTTGCGC 43913 ||| || ||||| || ||||| || ||||| |||||||| ||||| || ||| || | Sbjct 7039499 GGCTTTCTTTGCAGCAAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGCGTTAGC-C 7039441 Query 43914 AAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||||| || | | ||||| || || || || | || |||||| |||| ||| | Sbjct 7039440 AAGAAGTTCAGATCATC-GAAGCCCGCTGATTCTACAGCTTCCAAATTACCATGGAACAC 7039382 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAG 44032 || ||||| |||||||| ||||| || || || || ||||| |||||| | || | | Sbjct 7039381 ATACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGATTCCAAGGAAAGG 7039322 Query 44033 CATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCC 44092 || | || ||||| | || || | ||| || || |||||||||||| Sbjct 7039321 GATTTTCTTTTCAATGCCACTGAGACCATGCCTTGTGCCAAGAGGAAGGCAGACTGGGCC 7039262 Query 44093 CTTAAATGGAT--AAATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTT 44149 | | ||||| | ||| | | | | ||||||| | |||| || ||||| | Sbjct 7039261 TTGCATTGGATCGAGGACCAAGAGGTCACCTGTGGAGAAAGTGTTGTGGCTTTTGCCGCA 7039202 Query 44150 G-TGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGG 44208 | ||||||| || |||||||| || || ||||| ||||| ||| | |||||| |||| Sbjct 7039201 GTTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATTGATATTCTGGCTCAAGAAATGAGG 7039142 Query 44209 TTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTG 44268 |||||||||| | || || || || || | || || | ||| | || || || || Sbjct 7039141 ACTGATGCCTGGCCTCACATTCTCCAACGAACTTATCAGCAGAGATAAGGGTTTGCACTG 7039082 Query 44269 CGATTTTGCTTGC 44281 | ||||| ||| Sbjct 7039081 TCACTTTGCCTGC 7039069 >seq48 Length=11824846 Score = 111 bits (122), Expect = 1e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | ||| ||||| |||||||| |||||||| ||||| || ||||| ||| Sbjct 3086633 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCATTTGCTGCTATATTCTGG 3086692 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||||| ||||| |||||||||| | || ||||| ||||| | || || | ||| Sbjct 3086693 TTAAAGAAAAGAGGTCTGATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 3086752 Query 44255 GAAG 44258 |||| Sbjct 3086753 GAAG 3086756 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 3096078 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 3096137 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 | || ||| ||| |||||||| Sbjct 3096138 AGCGAGTTTCAGAGTATCAGCG 3096159 >seq54 Length=10138281 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/162 (71%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599 || ||| ||||||||| || || | |||||| | || || ||||| ||||| ||||| Sbjct 6993929 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 6993988 Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 ||||| | ||||| ||||||||||| ||||| || | || || ||| | Sbjct 6993989 AGCATGGCTGGTAGCACAGGAGTCCATGACACTGTCGTCAACCAGTTGCTATCCAAAATT 6994048 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695 ||||| || | || ||||| || || ||||| ||||| ||| Sbjct 6994049 GACGGGGTAGAACAGCTGAACAACATCTTAGTCATTGGTATG 6994090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397423114117945