Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq228 91.5 1e-13 seq65 86.0 5e-12 >seq228 Length=1351672 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| ||||| |||||||| | |||| | || || Sbjct 29174 ACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCA 29233 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| | ||| |||| |||||||| || || | | | | ||||| || || | Sbjct 29234 AGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGG 29293 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || ||| | | || | ||||| ||| ||||| || || || |||| ||| Sbjct 29294 ATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTG 29353 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || ||||| || ||||||||||| ||||| |||| Sbjct 29354 CCAGTCAGGGTCTTCACAAAGATCTGCATTTCTGC 29388 >seq65 Length=8612916 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| |||||||||||||| | |||| | || || Sbjct 6272649 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTCC 6272590 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| ||||| |||| || ||||| || || ||||| | ||||| || | Sbjct 6272589 AGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGG 6272530 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | | || ||||| ||| ||| || || || || || | ||| Sbjct 6272529 ATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTG 6272470 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || ||||| || ||||| ||||| ||||| |||| Sbjct 6272469 CCAGTCAGGGTCTTCACGAAGATCTGCATCTCTGC 6272435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424899240529368