Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq57 100 3e-16 seq7 86.0 7e-12 >seq57 Length=10025392 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | || ||| | ||||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 79591 TGGTATGCGATTATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAAGAT 79532 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||||| | ||||| |||||| |||| |||| ||||| | ||| || || Sbjct 79531 TCCTGTAATCGGAAGAGCAATCAACAGAACCTGGGAACAATCAAATGCAGCAACCTGTGC 79472 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| | |||| ||| |||||||||| Sbjct 79471 ACAGAAATAGTAGAATATACCAGCAAAGATGAG 79439 >seq7 Length=35612534 Score = 86.0 bits (94), Expect = 7e-12 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 || ||||| ||||||||||| || |||||| ||| | || | ||||||||||||||||| Sbjct 33433254 GTGGAGGGCATCTTCTTCTCCGGCTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGAGG 33433196 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || ||||| || ||| |||||||||||||| || Sbjct 33433195 CCTGATGCCGGGCCTCACGTTCTCCAACGAGCTCAT 33433160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583211303030360