Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq7 100 3e-16 >seq7 Length=35612534 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 |||||| || ||||||||||| ||||| ||| | || ||||||||||| ||||| || Sbjct 33433255 CGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGAGG 33433196 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 ||| ||||||||||| | |||||||||||||| ||| | | || |||| Sbjct 33433195 CCTGATGCCGGGCCTCACGTTCTCCAACGAGCTCATTAGCAGAGATGAGG 33433146 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 60331 TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCA 60390 ||| | | ||| | ||||| || |||| ||||||| |||||| ||||||||||||||| Sbjct 33431467 TTTTCCGAGTGGAAAACCCGTTTGACTTCATGGAGAACATCTCCCTGGAAGGGAAGACCA 33431408 Query 60391 ACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||| ||||||||||| || || || Sbjct 33431407 ACTTCTTCGAGAAGCGGGTGGGCGAGTA 33431380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548478250814160