Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 seq17 122 7e-23 seq6 87.8 1e-12 >seq5 Length=37766398 Score = 143 bits (158), Expect = 2e-29 Identities = 129/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || ||||||||||| | |||| |||||| ||||| || || ||||| |||| | Sbjct 25977126 ACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 25977185 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103 ||||| ||||| || | ||| ||||| ||||| || |||||| Sbjct 25977186 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATG 25977227 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| ||||| || |||||||||||||| || || || || || || | ||| Sbjct 25979479 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTC 25979538 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 ||| |||| ||| ||| ||| |||||| ||||| | ||| ||||||||||| Sbjct 25979539 TCCTTCTTTTCTGCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 25979598 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||| || || ||||| || || ||||| | || ||||| || Sbjct 25979599 CCAGATTTTCACTCCCTTAGACGACAGTTCTTTAGCATTCGTGGATCC 25979646 >seq17 Length=24042557 Score = 122 bits (134), Expect = 7e-23 Identities = 179/247 (72%), Gaps = 11/247 (4%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || | |||||| | Sbjct 9080812 ATGAGCTCCTTTTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAACCCTGTCCTT 9080871 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| ||| |||| |||| ||||||||||| ||||| |||||||| ||||||| || Sbjct 9080872 TAAAGGCCTACTCTTCACGGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATT 9080931 Query 110499 CTGCTTGCC-TCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGC 110557 ||| || || |||| |||||| ||| | ||||| | | || | || || || || | Sbjct 9080932 CTGTTTACCTTCTG-CTGAAGTCGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCC 9080990 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 110615 || ||| |||| ||||| |||||||| || | |||||||||| ||| ||||| Sbjct 9080991 TGAG------CGGAGGCCAAGGCAGGTCTCCGTTCTTGCGGATGCCCATGTTCTGGGACA 9081044 Query 110616 C-GCGGC 110621 | ||||| Sbjct 9081045 CAGCGGC 9081051 >seq6 Length=37047529 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || || || ||||| |||| || |||||||| | | ||| | | |||| ||||| Sbjct 26345686 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGACTCTTCTCGGGA 26345745 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||| ||||| |||||||| ||||||| ||||| || ||| Sbjct 26345746 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 26345793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406276781496588