Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08]
6,789 sequences; 2,026,629,342 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 2e-29
seq17 122 7e-23
seq6 87.8 1e-12
>seq5
Length=37766398
Score = 143 bits (158), Expect = 2e-29
Identities = 129/162 (80%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| ||||||| ||| || |||||||| ||||| || | ||||||||||||||| |||||
Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || ||||||||||| | |||| |||||| ||||| || || ||||| |||| |
Sbjct 25977126 ACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 25977185
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103
||||| ||||| || | ||| ||||| ||||| || ||||||
Sbjct 25977186 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATG 25977227
Score = 96.9 bits (106), Expect = 3e-15
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||| || |||| ||||| || |||||||||||||| || || || || || || | |||
Sbjct 25979479 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTC 25979538
Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342
||| |||| ||| ||| ||| |||||| ||||| | ||| |||||||||||
Sbjct 25979539 TCCTTCTTTTCTGCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 25979598
Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||||| || || ||||| || || ||||| | || ||||| ||
Sbjct 25979599 CCAGATTTTCACTCCCTTAGACGACAGTTCTTTAGCATTCGTGGATCC 25979646
>seq17
Length=24042557
Score = 122 bits (134), Expect = 7e-23
Identities = 179/247 (72%), Gaps = 11/247 (4%)
Strand=Plus/Plus
Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438
||||||||| || || || || || || || ||||| |||| || | |||||| |
Sbjct 9080812 ATGAGCTCCTTTTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAACCCTGTCCTT 9080871
Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498
| ||| ||| |||| |||| ||||||||||| ||||| |||||||| ||||||| ||
Sbjct 9080872 TAAAGGCCTACTCTTCACGGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATT 9080931
Query 110499 CTGCTTGCC-TCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGC 110557
||| || || |||| |||||| ||| | ||||| | | || | || || || || |
Sbjct 9080932 CTGTTTACCTTCTG-CTGAAGTCGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCC 9080990
Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 110615
|| ||| |||| ||||| |||||||| || | |||||||||| ||| |||||
Sbjct 9080991 TGAG------CGGAGGCCAAGGCAGGTCTCCGTTCTTGCGGATGCCCATGTTCTGGGACA 9081044
Query 110616 C-GCGGC 110621
| |||||
Sbjct 9081045 CAGCGGC 9081051
>seq6
Length=37047529
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| || || || ||||| |||| || |||||||| | | ||| | | |||| |||||
Sbjct 26345686 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGACTCTTCTCGGGA 26345745
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| ||||| |||||||| ||||||| ||||| || |||
Sbjct 26345746 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 26345793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406276781496588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |