Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq228 111 1e-19 seq65 104 2e-17 seq126 82.4 7e-11 >seq228 Length=1351672 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| |||| || ||||| || || || Sbjct 29382 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCAGT 29323 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| |||||||| || ||||| | | || || Sbjct 29322 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGTCTGACCAG 29263 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||||| | || || || || | || || |||||| Sbjct 29262 CAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTACAAC 29203 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| || || || ||| | || ||||| Sbjct 29202 ATTCAGAAAGAATCCACCCTGCACTTGGT 29174 >seq65 Length=8612916 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || || || ||||| Sbjct 6272441 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 6272500 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | ||||| |||||| ||||| |||||| || ||||| || || || || Sbjct 6272501 GACACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 6272560 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||||| |||| || | || | || || ||||| Sbjct 6272561 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACAAT 6272620 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || ||||| ||| |||| || ||||| Sbjct 6272621 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCCCCGTCTGCGTGGGGGCAT 6272670 >seq126 Length=3816233 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051 |||| ||||| || ||| |||| | ||| | || || || | || || || ||| Sbjct 216043 AGATCTTTGTGAAGACTTTGACTAGTAAGACCATCACCCTCAAGGTTGAGCCCAGTGACA 216102 Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111 | || ||| ||||| || |||||||||||||||||||| || || || || || Sbjct 216103 CCATCAAGAATGTCAAGGTCAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAGAAGA 216162 Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171 | | || | ||||| |||||| ||||||| | || | ||||| |||||||||| Sbjct 216163 GGCTGATCTTTGCCGGTAAACAACTGGAAGATGG--GCTCCCTGTCCGACTACAACATTC 216220 Query 27172 AAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205 | || ||||| || | || |||| |||| || Sbjct 216221 AGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTT 216254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434881491737280