Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5 156 4e-33 >seq5 Length=37766398 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| |||| |||| Sbjct 25977078 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCC 25977137 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | || || || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 25977138 ATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 25977197 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| || || || ||||| ||| ||||| Sbjct 25977198 CAGAGGGCATGGCATGGAGGCAGGGCCATGGAAGGAAGATC 25977238 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||| ||||| || || || ||||| |||||||||| |||||||| | ||| Sbjct 25977238 GATCTTCCTTCCATGGCCCTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 25977179 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || || || | |||||||||| |||| ||||| ||| Sbjct 25977178 GGTGAGCTGTCCTGCCAGCTGTACCAGCGGTCAGCAGACATGGGGCTAGGTGTGCCCTTC 25977119 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 25977118 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 25977078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || || ||||| ||||| || || | Sbjct 25979489 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTCTCCTTCTTTT 25979548 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | ||| ||| ||| | ||||||| ||||| || ||||||| ||||||||||| || Sbjct 25979549 CT-GCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTCCCAGATTTT 25979607 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 ||| ||| ||||| || || || | ||||||| Sbjct 25979608 CACTCCCTTAGACGACAGTTCTTTAGCATTCGTGG 25979642 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 ||||||| | || || || ||||| ||| ||||| ||||||||||| ||||||| | Sbjct 25979642 CCACGAATGCTAAAGAACTGTCGTCTAAGGGAGTGAAAATCTGGGACGCCAACGGGTCCC 25979583 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411 | ||||| ||||||| | ||| ||| ||| | | | || || ||||| ||||| || Sbjct 25979582 GTGACTTCCTGGACAGCCTGGGATTCTCCAGC-AGAAAAGAAGGAGACTTAGGCCCCGTT 25979524 Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || || |||||||| || |||||||| || || Sbjct 25979523 TATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 25979489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448224359332080