Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq17 264 9e-66 seq39 219 3e-52 seq5 113 4e-20 seq61 98.7 8e-16 >seq17 Length=24042557 Score = 264 bits (292), Expect = 9e-66 Identities = 392/550 (71%), Gaps = 7/550 (1%) Strand=Plus/Minus Query 2137 ACTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTG 2196 || |||||||| || || ||||| || | || |||||||| | || || ||| | ||| Sbjct 9081066 ACACTAAACTGCATCGCCGCTGTGTCCCAGAACATGGGCATCCGCAAGAACGGAGACCTG 9081007 Query 2197 CCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCC 2253 || |||||||| || | |||||||| || |||| |||| |||||| | | |||| Sbjct 9081006 CCTTGGCCTCCGCTCAGGAATGAATTCAAGTATTTCCAAAGAATGACCACAACGACTTCA 9080947 Query 2254 ACTGACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATT 2313 | || ||||||||| | || |||||||| || ||||| ||||| || ||||| | Sbjct 9080946 GCAGAAGGTAAACAGAATTTGGTGATTATGGGTAGGAAGACCTGGTTCTCCATTCCCGTG 9080887 Query 2314 AAAAGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCA 2373 || || |||||||| || |||| | ||| | |||||||||||| | || || || || Sbjct 9080886 AAGAGTAGGCCTTTAAAGGACAGGGTTAATTTAGTTCTCAGTAGAGAACTCAAGGAACCT 9080827 Query 2374 CCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA 2433 ||| || ||||| ||| | || |||||| | ||| | || | || |||| |||| Sbjct 9080826 CCAAAAGGAGCTCATTTTCTCGCCAAAAGTCTGGATGATGCCTTAAAACTTAT-TGAGGA 9080768 Query 2434 -CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGA 2492 ||||| |||| | | | ||||| | | |||||||| | || || || || || ||| | Sbjct 9080767 GCCAGATTTAACAAATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCCGTTTATAA 9080708 Query 2493 GGAGAGCATTA-CAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAAT 2551 ||| ||| | |||| | || | ||| || ||| | |||||||| |||| ||| Sbjct 9080707 GGAAGCCATGAGCAAG-CCCGGCCATCAGTGACTTTTTGTGACAAGGATCATGCAGGAAT 9080649 Query 2552 TTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAAT 2611 ||||| | ||||||| || ||||||||| || | ||||| |||| || | || | Sbjct 9080648 TTGAAAGGGATACATTTTTTCCAGAAATTGATTTGGAGAAATATAAACTTCTCCCAGAGT 9080589 Query 2612 TTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATAT 2671 |||||||||| |||| || || || ||||| || |||| ||||||||||| ||| Sbjct 9080588 ACCCAGGTGTTCTTTCTGATGTCCAGGAGGAAAAAGGCATTAAGTACAAATTTGAAGTAT 9080529 Query 2672 ATGaaaaaaa 2681 |||||||||| Sbjct 9080528 ATGAAAAAAA 9080519 >seq39 Length=13454942 Score = 219 bits (242), Expect = 3e-52 Identities = 202/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1275 CCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATG 1334 || || ||||| | ||||| |||||||| ||| | || || ||||||||||| |||||| Sbjct 4103767 CCCCAGGAAGTCCTGATTGTGACATGGCAGAAAATCAAGGCTTCAAGCCCAGACAACATG 4103826 Query 1335 GCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAAC 1394 | |||||| || || || || ||||| || || |||| || || || ||||| |||||| Sbjct 4103827 GTCACTTTCAGCAAGGAACATGGGGTCGTGGTCCAGCAGGCCTATAAGGATAAGATGAAC 4103886 Query 1395 ATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGAT 1454 ||||| ||||| ||||| || |||||||| |||||||||||||| || || |||| || Sbjct 4103887 ATAACCGAGCTGGGACTTCAGAACACAACCATAACCTTCTGGAATACCACTCTGGACGAC 4103946 Query 1455 GAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGG 1514 || ||||| ||||||||| | || || || || || || |||||||| |||||||||| Sbjct 4103947 GAGGGGTGTTACAAGTGTCTCTTCAATACCTTCGGTTCCGGGAAGATTTCAGGAATAGCC 4104006 Query 1515 TGTCTAACCCTTTTTG 1530 || || ||||| |||| Sbjct 4104007 TGCCTCACCCTCTTTG 4104022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1553 CTATGAGTTATCTGAAGGAAGCTTAAATGTTACGTGCTCTGCAAATGCCCGCCCAGTACC 1612 |||| | ||||| |||| | ||||||| || |||||||| ||||||||||||| || Sbjct 4106151 CTATAAATTATCCGAAGACCACCTAAATGTCACTTGCTCTGCCAATGCCCGCCCAGCCCC 4106210 Query 1613 AACAATGGTATGGAATTTTAATGATACAGACAGCTACAATAATACTGAAATTATAACCCA 1672 |||| ||||| | || ||| | |||| | |||||| ||||| || || Sbjct 4106211 TGCAATCTCCTGGAAGGTCGCTGGGTCAGGAATGGACAACAGTACTGAGATTATCACACA 4106270 Query 1673 CCCCAATGGAACAACATCTATTGTCAGTGTTCTCTACATCAGAGATCCAAAAAAT 1727 ||||||||| || || ||| | ||||||| ||| |||||| ||| || || ||| Sbjct 4106271 CCCCAATGGGACCACGTCTGTCATCAGTGTCCTCCACATCAAAGACCCCAAGAAT 4106325 >seq5 Length=37766398 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | ||||| || |||||||| | ||||| || ||||||||| Sbjct 37069850 GTGGTGGAGGAGCTCTTCAGGGATGGAGTGAACTGGGGAAGGATTGTGGCCTTCTTTGAG 37069909 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 37069910 TTCGGTGGAGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 37069969 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || || |||||||||||| Sbjct 37069970 ATCGCTCTGTGGATGACAGA 37069989 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| || |||||||| || | || ||||||||| | || || || Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||| || |||||||||||||| | |||||||| ||||| || ||||| ||||| | Sbjct 25977126 ACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 25977185 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698 || || ||||| | | | || ||||||||||| |||||||| Sbjct 25977186 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATGGAA 25977230 >seq61 Length=9801302 Score = 98.7 bits (108), Expect = 8e-16 Identities = 206/306 (67%), Gaps = 16/306 (5%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || ||||| || | || |||||||| | || || ||| | ||||| Sbjct 1960606 CTAAACTGCATCATTGCTGTGTCCCAGAACATGGGCATCAGCAAGAATGGAGACCTGCCT 1960547 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGA---CATCTTCTTCCACT 2256 || || | || | ||||||||| || |||| |||| ||||| || | |||| | Sbjct 1960546 TGACCCTCACTCAGAAATGAATTCAAGTATTTCCAAAGAATGATCACAACCTCTTTAGCA 1960487 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | ||| || |||| ||||| || ||||| | | Sbjct 1960486 GAAGGTAAACAGAATTT---------GGGTAGGGAGACCTGGTTCTCCATTCCCG--AGA 1960438 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | ||||||| || |||| || ||| | |||||||||||| | || || || || | Sbjct 1960437 AGTATTGGCCTTTAAATGACAGGATTAATTTAGTTCTCAGTAGAGAACTCAAGGAACCTC 1960378 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGAC 2434 || || ||||| ||| |||| |||||| | ||| | || | || |||| | || Sbjct 1960377 CAAACGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCCTTAAAACTTATTGAGGAAC 1960318 Query 2435 CAGAAT 2440 |||||| Sbjct 1960317 CAGAAT 1960312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414442505800996