Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq19 118 7e-22 seq175 96.9 2e-15 seq65 93.3 3e-14 seq127 87.8 1e-12 seq4 87.8 1e-12 >seq19 Length=23049436 Score = 118 bits (130), Expect = 7e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||| | ||||| |||||||| || || ||||||||||| ||||| || Sbjct 10825318 AAGATGCAGATTTTCTTGAAAACTCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCC 10825259 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 10825258 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 10825199 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | |||| ||||| | ||| ||||||||||| | || |||||| || ||| Sbjct 10825198 CAGCAAAGACTAATCTTTGCTGTCAAGCAACTGGAAGATGGACACACTTTGTCTGACTAC 10825139 Query 23788 AACATACAAAAAGAGTCCAC 23807 | ||| ||||| |||||||| Sbjct 10825138 AGCATTCAAAAGGAGTCCAC 10825119 >seq175 Length=2568445 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || || |||||||| || |||||||||||||| || || ||||||||| | ||||| || Sbjct 778652 AAGATACAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCAAGGTTGAACCC 778711 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 778712 TTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 778771 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | | ||||| || ||| Sbjct 778772 CAGCAAAAACTGATCTTTGCTGGCAAGCAACTGGAAGATGGGTGTACTTTGTCTGACTAC 778831 Query 23788 AACATACAAAAAGAGTCC 23805 ||||| ||||| |||||| Sbjct 778832 AACATTCAAAAGGAGTCC 778849 >seq65 Length=8612916 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| ||||| || || ||| Sbjct 6272441 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 6272500 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| | | | ||||| |||| | ||| || || | ||||| || || Sbjct 6272501 GACACCACTGAGAGTGTCAAAACTAAAA-TCCAAGACCGGGAGGGCATCCCGCCTGACCA 6272559 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || |||||||||||||| ||||| || | ||||| | || ||||| Sbjct 6272560 GCAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACAA 6272619 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 6272620 TATTCAGAAAGAGTCCAC 6272637 >seq127 Length=3912380 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || |||||||||||||| || || ||||||||| | |||| || Sbjct 1384223 AAGATGCAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCAAGGTTGGACCC 1384164 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||| || | ||| |||| || || || || ||||| | || || ||| Sbjct 1384163 TTGGATACAATAAAAAATGTAAAGGCCAAGATCCGGGATAAGGAAGGAATTCCTCCTGAT 1384104 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||| | | ||| |||||||||||| || ||| | || ||| Sbjct 1384103 CAGCAAAGACTGATCTTT-CTGTCAAGCAACTGGAAGACAGACATACTCTGTCTGACTAC 1384045 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || || || Sbjct 1384044 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 1384007 >seq4 Length=40935223 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672 |||||||||| | ||||||||||| || || || ||||||||||| ||||| || | || Sbjct 21336592 GCAGATTTTCATGAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCCTCAGA 21336533 Query 23673 CACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 || || | |||||| || | || || | || ||||| | || || ||| | Sbjct 21336532 TACAGTAGAAAATATGAAGGC-CAAGATCCAGGTTAAGGAAGGAATTCCTCCTCTTCAGC 21336474 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 | | | || ||||| ||||| ||||||||||| | || ||||| || ||||||| Sbjct 21336473 AAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGGCGTACTTTGTCTGACTACAACA 21336414 Query 23792 TACAAAAAGAGT 23803 | | ||| |||| Sbjct 21336413 TTCTAAAGGAGT 21336402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337981632768812