Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08]
6,789 sequences; 2,026,629,342 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq19 140 8e-28
seq13 118 3e-21
seq4 116 9e-21
seq15 113 1e-19
seq127 100 7e-16
seq61 98.7 2e-15
seq49 98.7 2e-15
seq12 98.7 2e-15
seq228 93.3 1e-13
seq7 87.8 4e-12
seq5 87.8 4e-12
seq106 86.0 1e-11
>seq19
Length=23049436
Score = 140 bits (154), Expect = 8e-28
Identities = 168/228 (74%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGT---GGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAA 225548
||||||||||| ||||| | | |||||||| || ||||| | |||| || | |||
Sbjct 10825091 ACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAA 10825150
Query 225549 AGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
||| |||||||| || ||||| |||| ||||| |||| ||| || || || |||||
Sbjct 10825151 AGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAAT 10825210
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
|||||||| || |||||||| ||| ||| ||| || || || |||| ||| || ||
Sbjct 10825211 TCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTC 10825270
Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| ||||| ||||| ||||| | |||||| | ||| | ||||| ||
Sbjct 10825271 GAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318
>seq13
Length=31322082
Score = 118 bits (130), Expect = 3e-21
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| || ||||| |||||||| || ||||||| ||||| || | |||||
Sbjct 23496031 ACGAAGTCTCAATACCAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGC 23495972
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| | |||| || ||||| ||||| ||||| |||| ||| || ||||| | ||| ||
Sbjct 23495971 ACATCTGTCTTTCAGTTGCTTGCCAGCCAAGATCAGTCTTTGCTGATCGGGAGAAATTCC 23495912
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
| |||| || |||||||| ||| ||| ||| | || || ||| ||| || || |
Sbjct 23495911 TCCCTTATCCTGGATCTTGGCCTTTACACTTTCTGTCGTATCCAAGGGTTCAACCTCAAG 23495852
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| |||| | | | | |||| ||||| | ||||| ||
Sbjct 23495851 AGTGATGTTCTTCCTCATAAGGATTTTCATGAAAATCTGCATCTT 23495807
>seq4
Length=40935223
Score = 116 bits (128), Expect = 9e-21
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| ||||| |||| | ||| || | ||| ||||||
Sbjct 7265314 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAG----AGTGTGGCCATCT 7265369
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || |||||||| || || |||||||| |||
Sbjct 7265370 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCT 7265429
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| || ||||| || | || | || | ||||| |||
Sbjct 7265430 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTC 7265489
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| |||| || || | ||| | |||||||||
Sbjct 7265490 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 7265524
>seq15
Length=28312309
Score = 113 bits (124), Expect = 1e-19
Identities = 147/202 (73%), Gaps = 5/202 (2%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|| |||| ||| |||||||| ||||||||||||||||| | ||||| || | ||| |
Sbjct 28058571 ACAAAGTTTCAACACAAGGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAATGA 28058512
Query 225552 TCTCCCATCTTC----TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAA 225607
| |||||||| ||| ||||| ||||| ||||| |||| ||| || | || ||||
Sbjct 28058511 ACATCCATCTTCCAGTTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGACCAGGAGGAA 28058452
Query 225608 TACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGT 225667
| ||||||| || | | || || || | ||| ||| | || || ||| ||| || |
Sbjct 28058451 TTCCTTCCTCATCCTAGTTC-TTGGCCTTACATTTTCTGTTGTATCCAAGGGTTCAACCT 28058393
Query 225668 CTAACGTGATCGTCTTGCCCGT 225689
| || ||||| ||||| |||||
Sbjct 28058392 CGAAAGTGATGGTCTTACCCGT 28058371
>seq127
Length=3912380
Score = 100 bits (110), Expect = 7e-16
Identities = 158/225 (70%), Gaps = 1/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||||| | ||||| || | || |||
Sbjct 1384000 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGT 1384059
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || ||||| ||| ||||| |||| ||| || || || ||||| ||
Sbjct 1384060 ATGTCTGTCTTCCAGTTGCTTGACAG-AAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 1384118
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||||||| ||| ||| || || || || ||| | | || | |
Sbjct 1384119 TTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAACCTTGAG 1384178
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||| | ||||| | || | ||||| ||
Sbjct 1384179 AGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223
>seq61
Length=9801302
Score = 98.7 bits (108), Expect = 2e-15
Identities = 120/161 (75%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| ||||||| || ||| |||| || |||||| | | || ||||| || | || ||
Sbjct 1657101 CAAATTTACAATGTAATTGTTACTGCCCATGCCATCATAATAATTTT-TTCATAGTAATA 1657043
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || |||||| |||| ||||| || || |||||||||||||| ||||||
Sbjct 1657042 CCTATTATAATTGGTGGTTTCAGAAACTGATT-GTACCCTTAATGATTGGTGCACCTGAT 1656984
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACT 7712
|| || ||||| | || |||||||| | ||||| ||
Sbjct 1656983 ATAGCCTTTCCTCAAATAAATAATATAAGCTCCTGATTCCT 1656943
>seq49
Length=11612304
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 5/192 (3%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || || ||||| | ||||| | ||||| || | ||||||
Sbjct 472392 ACGAAGTCTCAACACAAGATGAAGCGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGT 472451
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| || ||||| ||| | ||||| ||| ||||| || ||||| ||
Sbjct 472452 ACGCCTGTCTTCCAGTTGCTTGCCAAC-----AAAGTCTTTGCTGGTCAGGAGGAATTCC 472506
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||| |||| ||| ||| ||| || || || |||| ||| | | |
Sbjct 472507 TTCCTTATCCTGGCTCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAG 472566
Query 225672 CGTGATCGTCTT 225683
||||| |||||
Sbjct 472567 AGTGATGGTCTT 472578
Score = 98.7 bits (108), Expect = 2e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| ||||| | |||||| | || ||||| | ||| | || |||||| |
Sbjct 3546226 AGTCTCAACACAAGATAAAGAGTGAACTCCTTTTGAAGATTATGTTCACACAAAGTACAT 3546167
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||| ||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct 3546166 CCATATTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 3546107
Query 225616 TTGTCTTGGATCTT 225629
|| |||||||||||
Sbjct 3546106 TTATCTTGGATCTT 3546093
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| ||||||| ||||| | ||||||||||||| | | || | || ||||||
Sbjct 1515494 ACGTAGTCTCAACACAAGAT----AGTGGATTCTTTTCGAAGGTTATGGTCACACAAAGT 1515549
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||| ||| || ||||| |||| |||| |||| ||| || || || ||||| ||
Sbjct 1515550 ACATCCATATTCCAGTTGCTTGACAGCAAAGACCAGTCTTTGCTGATCAGGAGGAATTCC 1515609
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| ||||||||||| ||| ||| ||| | || || ||| || | || |
Sbjct 1515610 TTCCTTATCTTGGATCTTGGCCTTTACATTTTCTCTTGTATCCAAGGGGTCAGCCTCGAG 1515669
Query 225672 CGTGATCGTCTT 225683
||||| |||||
Sbjct 1515670 AGTGATGGTCTT 1515681
>seq12
Length=31948864
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTT---TTTGGACATTGTAATCGGCCAAAG 225550
||||||||| ||||| || |||||||| || |||| | ||||| || | | |||
Sbjct 15540700 GAAGTCTCAACACAAGATGAAGAGTGGACTCCGCCGTTTGAATGTTGTAGTCAGGCCAAG 15540759
Query 225551 TTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610
| |||||||| | ||||||||||| ||||| ||| ||| || || || ||||| |
Sbjct 15540760 CACATCCATCTTCCAATTGCTTCCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGAATTC 15540819
Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||||||| || |||||||| ||| ||| ||| || || || || | || || | |
Sbjct 15540820 CTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAAGGATCAACCTTGA 15540879
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||| ||||| ||||| | ||||| | |||
Sbjct 15540880 GAGTG---GTCTTCCCCGTGAGGGTTTTCACGAA 15540910
>seq228
Length=1351672
Score = 93.3 bits (102), Expect = 1e-13
Identities = 151/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||||||||| || | ||||| || | | ||| | |||||
Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || | || || || || || || ||||| | | | || || |||||||||
Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCT 29290
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| || || ||| || |||||||| || || || || | ||||| ||
Sbjct 29291 TGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGT 29349
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715
|||||| |||| || || | || | |||||||
Sbjct 29350 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384
>seq7
Length=35612534
Score = 87.8 bits (96), Expect = 4e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||||| | ||||| || | ||||||
Sbjct 30012094 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 30012153
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||| | ||||| |||| ||||| |||| ||| || || || ||| | ||
Sbjct 30012154 ATGTCTATTTTCCAATTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAGTTCC 30012213
Query 225612 TTCCTTGTCTTGGATCTT 225629
||| || || | ||||||
Sbjct 30012214 TTCTTTATCCTAGATCTT 30012231
>seq5
Length=37766398
Score = 87.8 bits (96), Expect = 4e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || || | || ||| ||| || |||||||| || |||||||
Sbjct 521445 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGGGAATATTTCAGGGATAATG 521504
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| |||||||| ||||| ||| ||||| ||||
Sbjct 521505 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACAGGTCAA 521550
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || || ||||| || || || ||||| || || || |||||||| ||||||||
Sbjct 521877 AATACCTGTCCGTCAGTGATGGAAATGACATTCGTTGGAATGTAAGCAGACACATCACCA 521818
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | || ||||||||||||
Sbjct 521817 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 521770
>seq106
Length=4539998
Score = 86.0 bits (94), Expect = 1e-11
Identities = 158/227 (70%), Gaps = 11/227 (5%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || ||| || || || || | ||||| || | | ||||
Sbjct 3940673 ACGAAGTCTCAACACAAGATG--GAGCGGCCTCCTTCTGAATGTTGTAGTCAGACCAAGT 3940730
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGA-AGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610
|| | |||| || ||||| ||||| | |||| || | ||| | || || ||||| |
Sbjct 3940731 ACTTCTGTCTTTCAGTTGCTTGCCAGCAACAGATCAGGCTTTGCCGATCAGGAGGAATTC 3940790
Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| ||| || ||| |||| ||| ||| ||| || || ||| ||| ||| ||
Sbjct 3940791 CTTTCTTATCCTGGGTCTTGGCCTTTACATTTTCTATTGTATCTTAGGGTTCAAC----- 3940845
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACT-TGCATTTT 225716
| |||| ||||| ||||| || | |||| | || | | ||||||||
Sbjct 3940846 -CATGATGGTCTTCCCCGT-AAGGGTTTTCTCAAAAATCTGCATTTT 3940890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192427468791566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |