Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq19 140 8e-28 seq13 118 3e-21 seq4 116 9e-21 seq15 113 1e-19 seq127 100 7e-16 seq61 98.7 2e-15 seq49 98.7 2e-15 seq12 98.7 2e-15 seq228 93.3 1e-13 seq7 87.8 4e-12 seq5 87.8 4e-12 seq106 86.0 1e-11 >seq19 Length=23049436 Score = 140 bits (154), Expect = 8e-28 Identities = 168/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGT---GGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAA 225548 ||||||||||| ||||| | | |||||||| || ||||| | |||| || | ||| Sbjct 10825091 ACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAA 10825150 Query 225549 AGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 ||| |||||||| || ||||| |||| ||||| |||| ||| || || || ||||| Sbjct 10825151 AGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAAT 10825210 Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668 |||||||| || |||||||| ||| ||| ||| || || || |||| ||| || || Sbjct 10825211 TCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTC 10825270 Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | ||||| ||||| ||||| | |||||| | ||| | ||||| || Sbjct 10825271 GAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq13 Length=31322082 Score = 118 bits (130), Expect = 3e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || ||||| |||||||| || ||||||| ||||| || | ||||| Sbjct 23496031 ACGAAGTCTCAATACCAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGC 23495972 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | | |||| || ||||| ||||| ||||| |||| ||| || ||||| | ||| || Sbjct 23495971 ACATCTGTCTTTCAGTTGCTTGCCAGCCAAGATCAGTCTTTGCTGATCGGGAGAAATTCC 23495912 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 | |||| || |||||||| ||| ||| ||| | || || ||| ||| || || | Sbjct 23495911 TCCCTTATCCTGGATCTTGGCCTTTACACTTTCTGTCGTATCCAAGGGTTCAACCTCAAG 23495852 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| | | | | |||| ||||| | ||||| || Sbjct 23495851 AGTGATGTTCTTCCTCATAAGGATTTTCATGAAAATCTGCATCTT 23495807 >seq4 Length=40935223 Score = 116 bits (128), Expect = 9e-21 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| ||||| |||| | ||| || | ||| |||||| Sbjct 7265314 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAG----AGTGTGGCCATCT 7265369 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || |||||||| || || |||||||| ||| Sbjct 7265370 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCT 7265429 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || ||||| || | || | || | ||||| ||| Sbjct 7265430 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTC 7265489 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | ||||||||| Sbjct 7265490 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 7265524 >seq15 Length=28312309 Score = 113 bits (124), Expect = 1e-19 Identities = 147/202 (73%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 || |||| ||| |||||||| ||||||||||||||||| | ||||| || | ||| | Sbjct 28058571 ACAAAGTTTCAACACAAGGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAATGA 28058512 Query 225552 TCTCCCATCTTC----TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAA 225607 | |||||||| ||| ||||| ||||| ||||| |||| ||| || | || |||| Sbjct 28058511 ACATCCATCTTCCAGTTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGACCAGGAGGAA 28058452 Query 225608 TACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGT 225667 | ||||||| || | | || || || | ||| ||| | || || ||| ||| || | Sbjct 28058451 TTCCTTCCTCATCCTAGTTC-TTGGCCTTACATTTTCTGTTGTATCCAAGGGTTCAACCT 28058393 Query 225668 CTAACGTGATCGTCTTGCCCGT 225689 | || ||||| ||||| ||||| Sbjct 28058392 CGAAAGTGATGGTCTTACCCGT 28058371 >seq127 Length=3912380 Score = 100 bits (110), Expect = 7e-16 Identities = 158/225 (70%), Gaps = 1/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | ||||| || | || ||| Sbjct 1384000 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGT 1384059 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| ||| ||||| |||| ||| || || || ||||| || Sbjct 1384060 ATGTCTGTCTTCCAGTTGCTTGACAG-AAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 1384118 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||||||| ||| ||| || || || || ||| | | || | | Sbjct 1384119 TTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAACCTTGAG 1384178 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | ||||| | || | ||||| || Sbjct 1384179 AGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223 >seq61 Length=9801302 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| ||||||| || ||| |||| || |||||| | | || ||||| || | || || Sbjct 1657101 CAAATTTACAATGTAATTGTTACTGCCCATGCCATCATAATAATTTT-TTCATAGTAATA 1657043 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || |||||| |||| ||||| || || |||||||||||||| |||||| Sbjct 1657042 CCTATTATAATTGGTGGTTTCAGAAACTGATT-GTACCCTTAATGATTGGTGCACCTGAT 1656984 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACT 7712 || || ||||| | || |||||||| | ||||| || Sbjct 1656983 ATAGCCTTTCCTCAAATAAATAATATAAGCTCCTGATTCCT 1656943 >seq49 Length=11612304 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || || ||||| | ||||| | ||||| || | |||||| Sbjct 472392 ACGAAGTCTCAACACAAGATGAAGCGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGT 472451 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || ||||| ||| | ||||| ||| ||||| || ||||| || Sbjct 472452 ACGCCTGTCTTCCAGTTGCTTGCCAAC-----AAAGTCTTTGCTGGTCAGGAGGAATTCC 472506 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||| |||| ||| ||| ||| || || || |||| ||| | | | Sbjct 472507 TTCCTTATCCTGGCTCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAG 472566 Query 225672 CGTGATCGTCTT 225683 ||||| ||||| Sbjct 472567 AGTGATGGTCTT 472578 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| ||||| | |||||| | || ||||| | ||| | || |||||| | Sbjct 3546226 AGTCTCAACACAAGATAAAGAGTGAACTCCTTTTGAAGATTATGTTCACACAAAGTACAT 3546167 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||| ||| || ||||| ||||| ||||| |||| ||| || || || ||||| |||||| Sbjct 3546166 CCATATTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 3546107 Query 225616 TTGTCTTGGATCTT 225629 || ||||||||||| Sbjct 3546106 TTATCTTGGATCTT 3546093 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||||| ||||| | ||||||||||||| | | || | || |||||| Sbjct 1515494 ACGTAGTCTCAACACAAGAT----AGTGGATTCTTTTCGAAGGTTATGGTCACACAAAGT 1515549 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||| ||| || ||||| |||| |||| |||| ||| || || || ||||| || Sbjct 1515550 ACATCCATATTCCAGTTGCTTGACAGCAAAGACCAGTCTTTGCTGATCAGGAGGAATTCC 1515609 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| ||| ||| | || || ||| || | || | Sbjct 1515610 TTCCTTATCTTGGATCTTGGCCTTTACATTTTCTCTTGTATCCAAGGGGTCAGCCTCGAG 1515669 Query 225672 CGTGATCGTCTT 225683 ||||| ||||| Sbjct 1515670 AGTGATGGTCTT 1515681 >seq12 Length=31948864 Score = 98.7 bits (108), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTT---TTTGGACATTGTAATCGGCCAAAG 225550 ||||||||| ||||| || |||||||| || |||| | ||||| || | | ||| Sbjct 15540700 GAAGTCTCAACACAAGATGAAGAGTGGACTCCGCCGTTTGAATGTTGTAGTCAGGCCAAG 15540759 Query 225551 TTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | |||||||| | ||||||||||| ||||| ||| ||| || || || ||||| | Sbjct 15540760 CACATCCATCTTCCAATTGCTTCCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGAATTC 15540819 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||| || |||||||| ||| ||| ||| || || || || | || || | | Sbjct 15540820 CTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAAGGATCAACCTTGA 15540879 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||| ||||| ||||| | ||||| | ||| Sbjct 15540880 GAGTG---GTCTTCCCCGTGAGGGTTTTCACGAA 15540910 >seq228 Length=1351672 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || ||||||||||| || | ||||| || | | ||| | ||||| Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || | || || || || || || ||||| | | | || || ||||||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCT 29290 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || ||| || |||||||| || || || || | ||||| || Sbjct 29291 TGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGT 29349 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715 |||||| |||| || || | || | ||||||| Sbjct 29350 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq7 Length=35612534 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | ||||| || | |||||| Sbjct 30012094 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 30012153 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||| | ||||| |||| ||||| |||| ||| || || || ||| | || Sbjct 30012154 ATGTCTATTTTCCAATTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAGTTCC 30012213 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||| || || | |||||| Sbjct 30012214 TTCTTTATCCTAGATCTT 30012231 >seq5 Length=37766398 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| ||| || |||||||| || ||||||| Sbjct 521445 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGGGAATATTTCAGGGATAATG 521504 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122 | ||||||||||| |||||||| ||||| ||| ||||| |||| Sbjct 521505 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACAGGTCAA 521550 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||| || || ||||| || || || ||||| || || || |||||||| |||||||| Sbjct 521877 AATACCTGTCCGTCAGTGATGGAAATGACATTCGTTGGAATGTAAGCAGACACATCACCA 521818 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||||||||| | || ||||| || || | || |||||||||||| Sbjct 521817 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 521770 >seq106 Length=4539998 Score = 86.0 bits (94), Expect = 1e-11 Identities = 158/227 (70%), Gaps = 11/227 (5%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||| || || || || | ||||| || | | |||| Sbjct 3940673 ACGAAGTCTCAACACAAGATG--GAGCGGCCTCCTTCTGAATGTTGTAGTCAGACCAAGT 3940730 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGA-AGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || | |||| || ||||| ||||| | |||| || | ||| | || || ||||| | Sbjct 3940731 ACTTCTGTCTTTCAGTTGCTTGCCAGCAACAGATCAGGCTTTGCCGATCAGGAGGAATTC 3940790 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| ||| || ||| |||| ||| ||| ||| || || ||| ||| ||| || Sbjct 3940791 CTTTCTTATCCTGGGTCTTGGCCTTTACATTTTCTATTGTATCTTAGGGTTCAAC----- 3940845 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACT-TGCATTTT 225716 | |||| ||||| ||||| || | |||| | || | | |||||||| Sbjct 3940846 -CATGATGGTCTTCCCCGT-AAGGGTTTTCTCAAAAATCTGCATTTT 3940890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192427468791566