Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq67 168 6e-37 seq22 116 3e-21 seq54 107 2e-18 seq48 98.7 8e-16 seq7 86.0 5e-12 seq23 82.4 7e-11 >seq67 Length=8586409 Score = 168 bits (186), Expect = 6e-37 Identities = 352/521 (68%), Gaps = 9/521 (2%) Strand=Plus/Plus Query 4461 AACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGT 4520 ||||| || |||| | || || | |||||||| ||||| | | | || || ||| Sbjct 7038983 AACTCCTGCTCTAGCCTGACAGCATTGGTGATTATTTCTTTCACTCACTGCTTGGAAGGT 7039042 Query 4521 TTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTG 4580 || || || | |||| || || ||||| | ||| |||||||| | |||||| Sbjct 7039043 TTGCGTAGCTGGTGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTG 7039102 Query 4581 CTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAAT 4640 || || |||||||| || || || | || ||||| | |||| || || ||||| ||| Sbjct 7039103 CTGATAAGTTCGTTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAAT 7039162 Query 4641 ATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA-CGGCGGCAAACGCTACTAATCG 4699 || ||||| || ||||||||||| || ||||| | | |||||||| || || | | Sbjct 7039163 ATCAATGCAAAAGAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACT 7039222 Query 4700 GGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTT 4759 || | | | ||| ||| | ||||| | || ||||||| || || |||| Sbjct 7039223 TTCTCCACAGGTGACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTT 7039282 Query 4760 AACGCACGGAATTGTGTATATAGCGTT--AAATAATTTACTTTT--TTCAAATGGGTCTT 4815 | || || || || | | || || ||| || | | ||| || ||| ||| Sbjct 7039283 GGCACAAGGCATGGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAAT----CTT 7039338 Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875 ||| |||||||| || || || |||||||||||||||||||| | ||| || | ||| | Sbjct 7039339 TAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTT 7039398 Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935 | || | ||| || || | ||||| | | |||||||| | | || | || || | Sbjct 7039399 GGAAGCTGTAGAATCAGCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCA 7039458 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCC 4976 ||||||| |||||||| || || || |||||||| || ||| Sbjct 7039459 AGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq22 Length=20942318 Score = 116 bits (128), Expect = 3e-21 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 31769 CTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCT 31828 || || |||||| | | ||| || || ||||| |||||||| ||| || ||||||| Sbjct 6678536 CTTGTGAAAACCCACAATCAGATAGCTCCTCCTTCTGGGTGCTATGGAAGAGTAGCTCCA 6678595 Query 31829 AGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGAC 31888 | || || | ||| | |||||||||| || || || || |||||||||||| ||| Sbjct 6678596 CGTTCCGGTTGGGCTGCAGAACACTTTATAGATGTAGGAGCTGGTGTTATAGATGAAGAT 6678655 Query 31889 TATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATA 31945 ||||||||||| |||| |||| ||||||||||||| |||||||| | || || Sbjct 6678656 TATAGAGGAAATCTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAAT-TTGAAG--TA 6678712 Query 31946 AAAAAGGGCGA 31956 |||||||| || Sbjct 6678713 AAAAAGGGAGA 6678723 >seq54 Length=10138281 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 31769 CTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCT 31828 || || |||||| | ||||| || || ||||| |||||||| | | | ||||||| Sbjct 890305 CTTGTGAAAACCCACATTCAGATAGCTCCTCCTTCTGGGTGCTATGCAAGTGTAGCTCCG 890246 Query 31829 AGATCT----GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 | || || ||||| | ||||||||||| || || || || |||||||||||| Sbjct 890245 TGTTCCTTCCGGCTTGGCTGCAAAACACTTTATAGATGTAGGAGCTGGTGTTATAGATGA 890186 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGGAGAAAAATCATACAGTAT 31944 ||| ||||||||||| |||| |||| ||||||||||||| ||||| || | Sbjct 890185 AGATTATAGAGGAAATCTTGGTGTTGTACTGTTTAATTTTGGCAAAAAAAAATTTGAAGT 890126 Query 31945 AAAAAAGGGCGA 31956 ||||||||| || Sbjct 890125 AAAAAAGGGTGA 890114 >seq48 Length=11824846 Score = 98.7 bits (108), Expect = 8e-16 Identities = 100/130 (77%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || |||||||| || || || || ||||||||||||||||| ||||| | Sbjct 3080023 AAAATCTT---ACCAAGTTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAAGA 3079967 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 | || || ||||| |||| || || || ||||| || | |||||| || | ||| || | Sbjct 3079966 CGTGGGAGATAAAATACTTCTCATCTGGTTTAAGCTTGTGCCAGTGCGGGAGATCCTTTG 3079907 Query 5041 TTAAATCAAC 5050 ||| ||||| Sbjct 3079906 ATAAGTCAAC 3079897 Score = 89.7 bits (98), Expect = 4e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || |||||||| || |||||||| ||||| |||||||| ||||| |||||| Sbjct 3096156 TGATACTCTGAAACTCGCTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 3096097 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 3096096 ATAAAATCAAAGGGATT 3096080 >seq7 Length=35612534 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| || ||||| || ||||| | || ||||| | |||| ||| || Sbjct 33433148 TCATCTCTGCTAATGAGCTCGTTGGAGAACGTGAGGCCCGGCATCAGGCCTCGCTTCTTG 33433207 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || | || || || || || ||||| ||||| || |||||||| ||||| Sbjct 33433208 AGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAACGCC 33433267 Query 4692 AC 4693 || Sbjct 33433268 AC 33433269 >seq23 Length=20579130 Score = 82.4 bits (90), Expect = 7e-11 Identities = 107/146 (73%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| || || |||||||| || ||||||| |||||| ||| || || | | Sbjct 7834507 CAGGCAAAGTCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAATG--AGG 7834564 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || |||| | ||| || || ||||| ||||| | ||||| || | | ||||||| Sbjct 7834565 CCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGAAC-ATAAAAGAAG 7834623 Query 4668 ATGCCTTCTACGGCGGCAAACGCTAC 4693 || ||||| || |||||||||||||| Sbjct 7834624 ATTCCTTCCACTGCGGCAAACGCTAC 7834649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427014265515737