Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 >seq5 Length=37766398 Score = 134 bits (148), Expect = 1e-26 Identities = 127/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || ||||||||||| | |||| |||||| ||||| || || ||||| || | Sbjct 25977126 ACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 25977185 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| ||||| || | ||| ||||| ||||| || |||||| Sbjct 25977186 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATG 25977227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| || ||||||||||| || || || || || || || | ||| Sbjct 25979479 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTC 25979538 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||| |||| ||| ||| ||| |||||| ||||| | ||| ||||||||||| Sbjct 25979539 TCCTTCTTTTCTGCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 25979598 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| || || ||||| || || ||||| | || ||||| || Sbjct 25979599 CCAGATTTTCACTCCCTTAGACGACAGTTCTTTAGCATTCGTGGATCC 25979646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369476626627859