Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq67 237 2e-57 seq57 132 7e-26 seq54 107 3e-18 seq22 105 9e-18 >seq67 Length=8586409 Score = 237 bits (262), Expect = 2e-57 Identities = 532/791 (67%), Gaps = 25/791 (3%) Strand=Plus/Plus Query 47791 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCA 47847 || |||| |||||| |||| || | |||| || ||| || ||||| ||||||| Sbjct 7038717 TTGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCCGACTTGACATCACTCCCA 7038776 Query 47848 TTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 47907 | | ||||| ||||| || | ||||| || || || | | |||| | | | |||| Sbjct 7038777 TCCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTTCATCCTCCCTTGTAGTTAAATAT 7038836 Query 47908 TTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttt--ttAAATCCTAATTCTGA 47965 | ||||| || |||| || ||| || | | | || || | |||||| | | | Sbjct 7038837 TCTCCATGAAGTCAAGTGCATTTTCTAC-TCAGAAGGCCTTACTGAAATCCAGCTCCAGC 7038895 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 | | ||||| || || | |||||| || | | |||| | ||| |||| || || Sbjct 7038896 A-TGAGTCTGTCAGCCATGAATTCAATGCACCGCGTCATTAAAGTACAGCTCATCCCAAT 7038954 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 || || |||| | ||||| || || ||||| || || | ||||||||| || Sbjct 7038955 GAGCTTCCCTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTAGCCTGACAGCATTGGTGAT 7039014 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGA-----TAC--AACAAATGTTTAAACATTA 48138 ||| || | || |||||| |||| | | | | ||||| |||| || Sbjct 7039015 TAT-----TT--CTTTCACTCACTGCTTGGAAGGTTTGCGTAGCTGGTGTTTGAACACTA 7039067 Query 48139 AACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGA 48198 || ||||| | ||| || | ||| | |||||| || || | |||||| || ||||||| Sbjct 7039068 GGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCGTTGGAGAATGTGA 7039127 Query 48199 GACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGA 48258 | || ||||| ||||| | ||| |||||||| ||||| || ||||| |||||||||| Sbjct 7039128 GGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAAAGA 7039187 Query 48259 ATATGCCTTCTA-CGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT 48317 | || ||||| | | || ||||| || || || ||||| | || | || | || Sbjct 7039188 AGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGTGACCTCTTGGTCC 7039247 Query 48318 ---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374 ||||| | ||||| || |||||| |||| |||||||||| || || | ||| Sbjct 7039248 TCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCATGGTCTCAGTGGCA 7039307 Query 48375 TTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434 || || ||||| | |||| ||| |||||||| |||||| || || | ||||||||| Sbjct 7039308 TTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATAC 7039367 Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494 ||||| || || || | ||| || | || || || | ||| || || | ||||| || Sbjct 7039368 ATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCAGCGGGCTTCGATG 7039427 Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 ||||| || || | || || || |||| || ||||||||||| ||||| || || Sbjct 7039428 ATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCT 7039487 Query 48555 GCAAAAAATGC 48565 ||||| || || Sbjct 7039488 GCAAAGAAAGC 7039498 >seq57 Length=10025392 Score = 132 bits (146), Expect = 7e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| |||||||||||||| || || |||||||| ||||| | || Sbjct 65923 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 65982 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 65983 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 66042 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 66043 TTTCTTATACCAT 66055 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| || ||| Sbjct 90059 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 90118 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || ||||| || || | ||| | ||||||| Sbjct 90119 TATGTTTCAATAGCAGCATCGATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 90178 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 90179 ATATGTTGTGGTCTTTCAGCC 90199 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 80780 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 80839 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 80840 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 80899 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | |||||||||| Sbjct 80900 TCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 >seq54 Length=10138281 Score = 107 bits (118), Expect = 3e-18 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| ||| ||||| | |||||||| |||| | | ||| | |||| Sbjct 890008 TCCAGTAGAACCAAAACCTCCTGAGC--CCCTTTCAGTGTCATCCAAAACTTGAATTTCC 890065 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || |||||| | || |||| | | || || || || ||| |||||| | ||| Sbjct 890066 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTTGGTCACCCTTTTTT 890125 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | ||||||| | | ||| ||| ||| | ||| | || |||| | |||||||||||| Sbjct 890126 ACTTCAAATTTTTTTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCT 890185 Query 46054 TCATCTATTACTCCCCCTCCCACATCGATA 46083 |||||||| || || |||| ||||| ||| Sbjct 890186 TCATCTATAACACCAGCTCCTACATCTATA 890215 >seq22 Length=20942318 Score = 105 bits (116), Expect = 9e-18 Identities = 179/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||| ||| ||||| | |||||||| |||| | | ||| |||||| Sbjct 6678829 TCCAGTAGAATGAAAACCTCCTGAGC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCC 6678772 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || |||||| | || ||| ||| || || | || |||| || ||| | ||| Sbjct 6678771 TCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTCTCCCTTTTTT 6678712 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | ||||||| | ||||| ||| ||| | ||| | || |||| | |||||||||||| Sbjct 6678711 ACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCT 6678652 Query 46054 TCATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| ||||| ||| || | || | || || | ||| Sbjct 6678651 TCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACCGGAACGTGGA 6678592 Query 46111 GCTATTCTTCCATAACA 46127 |||| ||||||||| || Sbjct 6678591 GCTACTCTTCCATAGCA 6678575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694609848668960