Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq67 203 5e-47 seq57 127 3e-24 seq48 98.7 1e-15 seq22 86.0 9e-12 >seq67 Length=8586409 Score = 203 bits (224), Expect = 5e-47 Identities = 497/746 (67%), Gaps = 22/746 (3%) Strand=Plus/Plus Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382 |||||| |||||||| | || || |||||||| | ||||| || || || | | || Sbjct 7038763 TGACATCACTCCCATCCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTTCATCCTCCC 7038822 Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttt--ttA 46440 || | | | ||||| ||||| || |||| | ||| || | | || || | | Sbjct 7038823 TTGTAGTTAAATATTCTCCATGAAGTCAAGTGCATTTTCTAC-TCAGAAGGCCTTACTGA 7038881 Query 46441 AATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA 46500 ||||| | | | | | ||||| || || | |||||| || || |||| | | Sbjct 7038882 AATCCAGCTCCAGCA-TGAGTCTGTCAGCCATGAATTCAATGCACCGCGTCATTAAAGTA 7038940 Query 46501 CAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTG 46560 || |||| || ||||| || | || | ||||| || || ||||| || || | || Sbjct 7038941 CAGCTCATCCCAATGAGCTTCCCTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTAGCCTG 7039000 Query 46561 ACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGA-----TGCAT--CAA 46613 ||||||| | ||||| | || || |||||| |||| ||| | | Sbjct 7039001 ACAGCATTGGTGATTAT------TTCT-TTCACTCACTGCTTGGAAGGTTTGCGTAGCTG 7039053 Query 46614 ATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTC 46673 ||||| |||| || || ||||| | ||| || | || | |||||| || || | ||| Sbjct 7039054 GTGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTC 7039113 Query 46674 GTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAA 46733 ||| || |||||||| |||||||| ||||| | || |||||||| ||||| || || Sbjct 7039114 GTTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAA 7039173 Query 46734 AGATCCAGAAAAGAATATGCCTT-CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC 46792 ||| ||||||||||| || |||| | || || || || || |||| || ||||| | Sbjct 7039174 AGAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGG 7039233 Query 46793 TGGCATC---ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCA 46849 || | || | | ||||| ||||| || ||||| |||| ||||||||| Sbjct 7039234 TGACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCA 7039293 Query 46850 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTA 46909 | || || | ||||| || ||||| | |||| | |||||||| || || || | Sbjct 7039294 TGGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAA 7039353 Query 46910 TTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAAC 46969 | | |||||||||||||| ||||| |||| ||| || | || || || | ||| || | Sbjct 7039354 TGAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATC 7039413 Query 46970 ATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTA 47029 | | ||||| | ||||| || ||| | || || || ||| || ||||| |||| Sbjct 7039414 AGCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTA 7039473 Query 47030 TTCCATCACTAGCAGCAAAAAATGCC 47055 | ||||| || || ||||| || ||| Sbjct 7039474 TGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 65923 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 65982 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 65983 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 66042 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 66043 TTTCTTATACCAT 66055 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| |||||||| ||||| | || || || || || || || || ||||| Sbjct 95338 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAATG 95397 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 95398 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 95457 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | |||||| || || | |||| || || || |||||||||| Sbjct 95458 TCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCATGG 95503 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| | |||||||| || ||| Sbjct 90059 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 90118 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 90119 TATGTTTCAATAGCAGCATCGATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 90178 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||| || |||| ||| Sbjct 90179 ATATGTTGTGGTCTTTC 90195 Score = 87.8 bits (96), Expect = 3e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044 || || || || || || || || || || |||||||| ||||| || || | |||||| Sbjct 76536 GCCAGATCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 76595 Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104 || | || | || || |||| ||||||||||| | |||||||| |||||||| || Sbjct 76596 AATAACTGG-GCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAG 76654 Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || || || || |||||||| | ||| | ||||| || Sbjct 76655 ACCTTGTACCCCGATTCCAATAGGGCGATGACGTTTATTTGA 76696 >seq48 Length=11824846 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| |||||||| || || | || | Sbjct 3086756 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCT 3086697 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | | ||| |||||||| || || ||||| || ||||| || ||||||||||| || || | Sbjct 3086696 TTAACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 3086637 Query 46772 CGAC 46775 | || Sbjct 3086636 CCAC 3086633 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| ||||| | Sbjct 3076320 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCGGG 3076261 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| ||||| || ||||||| Sbjct 3076260 GTACTGGATTGGAAAGATGACAAATC 3076235 >seq22 Length=20942318 Score = 86.0 bits (94), Expect = 9e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 44411 TTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATC 44470 ||| |||||||||| || |||||| | || ||| ||| || || | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 44471 ACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCC 44530 || | |||| || ||| | ||||| ||| ||| | || | || |||| || || Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 44531 CCTATAATCTTCATCTATTACTCCACCTCCCACATCAATA 44570 ||||||||||||||||| || ||| |||| ||||| ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATA 6678622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712873898604480