Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq186 122 2e-22 seq4 114 3e-20 seq19 96.9 8e-15 seq65 95.1 3e-14 seq175 87.8 4e-12 seq14 84.2 5e-11 >seq186 Length=2028101 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || |||||||| ||||||||||| || | | ||| | ||||| Sbjct 786266 GAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATC 786207 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || || ||||| |||||||||||||| | | ||| |||||||| || Sbjct 786206 TTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATC 786147 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAAT 152068 || || || ||| ||| |||| | | | || ||| ||| | || || || || Sbjct 786146 CTGGATCTTGGCTTTCACATTCTCAATGGTATC---ACTGGGCTCCATCTCCAGGGTGAT 786090 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||||| |||||||| Sbjct 786089 GGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATTTT 786051 >seq4 Length=40935223 Score = 114 bits (126), Expect = 3e-20 Identities = 163/228 (71%), Gaps = 10/228 (4%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || |||||||| ||||||| ||| || | ||| Sbjct 7265304 CCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAG----AGT 7265359 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 |||||||| || || || || ||||| |||||||||||||| | | ||| || Sbjct 7265360 GTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCC 7265419 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| ||||| || || || ||| |||| | | | || ||| ||| | || Sbjct 7265420 TTCCTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTATC---ACTGTGCTCAGCCTC 7265476 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || ||||| || || ||||||||||||| |||||||| Sbjct 7265477 CAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 7265524 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||||| | |||| ||| | |||||||| || | ||||| | ||||||||| Sbjct 21336386 ACAAGATGAAGAGCACACTCCTTTAGAATGTTGTAGTCAGACAAAGTACGCCCATCTTCC 21336445 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || || || || || ||||| | | ||||||||||| | || Sbjct 21336446 AGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGAAGAGGAGGAATTCCTTCCTTAACCTGG 21336505 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || | | | ||||| | ||||| || || || ||||| || || || Sbjct 21336506 ATCTTGGCCTTCATATTTTCTACTGTATCTGAGGGTTCAACCTCGAGAGTGATGGTCTTC 21336565 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGC 152102 || ||||| || |||| ||| | |||| Sbjct 21336566 CCTGTGAGGGTTTTCATGAAAATCTGC 21336592 >seq19 Length=23049436 Score = 96.9 bits (106), Expect = 8e-15 Identities = 156/224 (70%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGA---GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||||||||| || ||||| ||||| ||| |||| || | ||||| Sbjct 10825095 AGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTG 10825154 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || || | || ||||| || || ||||| || | | |||||| Sbjct 10825155 TGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCT 10825214 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || || ||| | |||| | || || || || || ||| Sbjct 10825215 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGA 10825274 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||||||||| |||| ||| | |||||| || Sbjct 10825275 GTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq65 Length=8612916 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || |||||||| || || ||||| || | | || | ||||| || | Sbjct 6272647 CAAG-TGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTCCA 6272589 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||| || || || | ||||||||| | || ||| || ||| ||||| | Sbjct 6272588 GCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGGA 6272529 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGTTT 152073 |||| ||||||| |||| | |||| ||| || || || || || || || | Sbjct 6272528 TTTTAGTTTTGACACTCTCAGTGGTGTC---ACTGGGTTCGACCTCGAGGGTGATGGTCT 6272472 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || ||||||||||||| |||||| Sbjct 6272471 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq175 Length=2568445 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | ||||||||||| ||||| ||||| |||||||| || | ||||| | | Sbjct 778872 AGTCTCAACACAAGATGAAGCAGGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAC 778813 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || | ||||| || | | ||||||||| Sbjct 778812 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCC 778753 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || | || || | ||||| Sbjct 778752 TTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTTGAGAGTG 778693 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || |||||||| || ||||| || | ||| || || Sbjct 778692 ATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGTATCTT 778652 >seq14 Length=29593583 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 11200232 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGC 11200291 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| ||| || || || || ||||| || || ||||| || | | ||||||||| Sbjct 11200292 CCATTTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 11200351 Query 152007 TTTTCTTGAATTTT 152020 || || || || || Sbjct 11200352 TTATCCTGGATCTT 11200365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153720435979419