Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq34 154 2e-32 seq75 123 4e-23 >seq34 Length=16311045 Score = 154 bits (170), Expect = 2e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| | |||||| |||||||||||| || || || || ||||| |||||| Sbjct 10488098 GTCTGGAACAACCGTTCGTCATCCCATTCTGGATGCTCCTGCTTAAGCACATCACACACC 10488157 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||| ||||| | ||||| || ||||| |||||||| || ||||| ||||| ||||| Sbjct 10488158 CTGTTATGTTCGCGCAGCCAAATCGTGGCATACATCATCAGACCAGGCACCAGACCAAAT 10488217 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 |||| || || || || || |||| || ||| || || | || || |||||||| | Sbjct 10488218 ACCTCCTGGCCCACCGCAAGCCGCAGGTGTTCAGGGACATGAGGCGGGTAGATCATCTCG 10488277 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAA 9478 ||||| |||||||| | ||| ||||| | || || |||| Sbjct 10488278 GCCTGGGTATCTTTGACTGTGGGAGGATAGACCTCTCCATCAA 10488320 Score = 116 bits (128), Expect = 5e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| |||||||||||||| || || || |||||| ||| ||| | || Sbjct 10489202 TCTTACCCCATGACCCAGTCCTTTAGTAAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 10489261 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 |||||| || ||||| || ||| |||| || || ||||| || || |||||||||||||| Sbjct 10489262 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCGAACATCAAATTTGTGCCCTGGGGATC 10489321 Query 9769 GGGAGTGAA 9777 ||| |||| Sbjct 10489322 AGGAATGAA 10489330 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | |||||||| || || | || || ||||| ||| || | | Sbjct 10489814 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGACACAGGAGGAAGAGCTCTGGTG 10489873 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||||||||| || || |||||||||||| || | |||| || || || | Sbjct 10489874 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCATAGTGTGCATTATAAGTT 10489933 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || |||||||||||||||| ||||| |||| Sbjct 10489934 GGTGGGCTGTCAATCAAATGTGATCTGGCTGA 10489965 Score = 93.3 bits (102), Expect = 6e-14 Identities = 191/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 || || || || ||||| | |||| ||||||||||| | || | |||| ||| Sbjct 10486540 GGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGGAGGCAGTATTGATGATTTTA 10486599 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| || ||||| || ||||| || |||||||| || || || || || Sbjct 10486600 AAACCCACTTCACCGCCAAAAGTGCTAGGTTTCCAGTAGTGAGGAGAACATATAGGATTG 10486659 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || || || | ||| || || || || | || | ||| ||||||| |||||| Sbjct 10486660 CCCATCAGTCCCTTCAAGGAAAAGGGGGCTCCGAGTTCTACCATGGTCTCACCAAAGATG 10486719 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 | || || |||| ||| |||| | | | |||||||||| || || | ||| Sbjct 10486720 CTATCTGGGCGAGGCTCTTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 10486779 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || || | | |||||||| || ||||| |||||||| Sbjct 10486780 CCATAGAGCTCTTCTAACTCGGCAGCCATTTCCTTCTCTCCTGT 10486823 >seq75 Length=6310612 Score = 123 bits (136), Expect = 4e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 |||| || || ||| |||| || || || || ||||| | |||||||||| | || | Sbjct 6036668 TCTTAACAATGTTGAAGCCCATTTCACCACCAAACGTGCTTGACTTCCAGTACTCGGGAG 6036609 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 | |||||| | ||| | | |||||| |||||||| || |||||||| | || | || | Sbjct 6036608 AACAGATGGCATTCCCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 6036549 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 |||| || ||||||| ||| ||| || ||| || | | | ||| | ||| | ||||| Sbjct 6036548 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCA 6036489 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584 || || | |||||| || || || | ||| || || ||||||||||||||| Sbjct 6036488 AGGCATCAATGTCTCCATATAGCTCCTCCAATTCAGCTGCCATCTCCTTTTCTCCT 6036433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716815964042560