Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq19 134 3e-26 seq126 123 6e-23 seq65 109 1e-18 seq12 104 6e-17 seq49 102 2e-16 seq14 102 2e-16 seq15 89.7 1e-12 seq45 84.2 5e-11 >seq19 Length=23049436 Score = 134 bits (148), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| ||||||||||||| || || || ||||| |||||||| ||| ||| || Sbjct 10825312 CAGATTTTCTTGAAAACTCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGAT 10825253 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || |||||||| ||||| || |||||| Sbjct 10825252 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 10825193 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || | || || || ||||||||| ||| | | || || | | | Sbjct 10825192 AGACTAATCTTTGCTGTCAAGCAACTGGAAGATGGACACACTTTGTCTGACTACAGCATT 10825133 Query 178104 CAAAAAGAATCAAC---ACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 10825132 CAAAAGGAGTCCACTCTTCTTCATCTTGTGTTGAGACT 10825095 >seq126 Length=3816233 Score = 123 bits (136), Expect = 6e-23 Identities = 152/205 (74%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACA 177984 || || ||||| ||| | || | || || ||||||||| |||| || || ||| ||| Sbjct 216045 ATCTTTGTGAAGACTTTGACTAGTAAGACCATCACCCTCAAGGTTGA--GCCCAGTGACA 216102 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 ||||| |||| ||||| |||||||| ||||||||||| ||||| || |||||| | Sbjct 216103 CCATCAAGAATGTCAAGGTCAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAGAAGA 216162 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 | || ||||| ||||| ||||| || |||||||| | | || |||| || ||| | | Sbjct 216163 GGCTGATCTTTGCCGGTAAACAACTGGAAGATGG--GCTCCCTGTCCGACTACAACATTC 216220 Query 178105 AAAAAGAATCAACACTGCATCTTGT 178129 | ||||| || || ||||| || || Sbjct 216221 AGAAAGAGTCCACTCTGCACCTGGT 216245 >seq65 Length=8612916 Score = 109 bits (120), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||||||||| ||| | ||| Sbjct 6272444 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGTGAC 6272503 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||| |||| |||||| || || || ||| || || ||||| || |||||||| Sbjct 6272504 ACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAGCAG 6272563 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| |||||||| || ||||| | || || | || || || | Sbjct 6272564 CGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACAATATT 6272623 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || ||||| |||| Sbjct 6272624 CAGAAAGAGTCCACCCTGCA-CTTG 6272647 >seq12 Length=31948864 Score = 104 bits (114), Expect = 6e-17 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 |||||||||||||| ||||| || || || ||| ||| |||| || || || || Sbjct 15540913 ATTTTCGTGAAAACCCTCACGGGGAA---GACCACTCTCAAGGTTGATCCTTCGGATACG 15540857 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || || || || || ||||| ||||| || |||||||| ||||| || |||||| || Sbjct 15540856 ATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGA 15540797 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCA 178105 | ||||| || || || || | ||||||||| | || | ||| || || ||| | || Sbjct 15540796 CGGATCTTTGCTGGGAAGCAATTGGAAGATGGATGTGCT-TGGCCTGACTACAACATTCA 15540738 Query 178106 AA---AAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || |||||||| |||||||| Sbjct 15540737 AACGGCGGAGTCCACTCTTCATCTTGTGTTGAGACT 15540702 >seq49 Length=11612304 Score = 102 bits (112), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAG----GAAAAACGATCACCCTCGAGGTGGAAAGCTC 177979 || |||||||||||||| || |||| | || || ||||| ||| ||| ||| ||| Sbjct 472609 CAGATTTTCGTGAAAACCCTAACAGGGAAGGAAGACCATCACTCTCAAGGCTGAACCCTC 472550 Query 177980 AGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCA 178039 || || || || || || || |||| ||||| || |||||||| ||||| ||||| Sbjct 472549 GGATACAATAGAAAATGTAAAGGCCAAGAGCCAGGATAAGGAAGGAATTCCTCCTGACCA 472490 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 |||| ||||| | || || || || || ||||| | | ||| | | || || || Sbjct 472489 GCAAAGACTT-TGTT----GGCAAGCAACTGGAAGACAGGCGTACTTTGTCTGACTACAA 472435 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | | ||||| | || || || |||||||| |||||||| Sbjct 472434 CATTCAAAAGGCGTCCACGCTTCATCTTGTGTTGAGACT 472396 >seq14 Length=29593583 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010 || || ||||| || ||||| ||| ||| || || || || || || || ||||| Sbjct 4554942 AAGACCATCACTCTGGAGGTTGAACCCTCGGATACGATAGAAAATGTAAAGGCCAAGATC 4554883 Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 ||||| || |||||||| ||||||||||||||| |||| ||||| || || || || || Sbjct 4554882 CAGGATAAGGAAGGAATTCCTCCGGACCAGCAAAGACTGATCTTTGCTGGCAAGCACCTG 4554823 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 ||||||||| | ||| | | || || ||| | ||| Sbjct 4554822 GAAGATGGACGTACTTTGTCTGACTACAACATTCAA 4554787 >seq15 Length=28312309 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||| || || || || || ||||| ||||||| ||| || || Sbjct 28058350 CAGATTTTTGTGAAAATCCTAACGGGTAAGACCATCACTTTCGAGGTTGAACCCTTGGAT 28058409 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || | | || | | |||| | |||||||| ||||| | |||||| Sbjct 28058410 ACAACAGAAAATGTAAGGCCAAGAACT-AGGATGAGGAAGGAATTCCTCCTGGTCAGCAA 28058468 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTC----GAAGATGGAAGGACTCTTGCCGATTATAA 178099 |||| ||||| || || || || || ||||||||| | | | | || || || Sbjct 28058469 AGACTGATCTTTGCTGGCAAGCAACTAACTGGAAGATGGATGTTCATTGTCTGACTACAA 28058528 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | | ||||||||||| || || || ||||| |||| ||| Sbjct 28058529 CATTCAAAAAGAATCCACTCTTCACCTTGTGTTGAAACT 28058567 >seq45 Length=12190309 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| |||||||| || || ||||| |||||||| | | ||| | Sbjct 8162251 CAGATTTTCGTGAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGGACCCTCGGGT 8162310 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || || || || ||| |||| |||| || |||||||| ||||| | |||||| Sbjct 8162311 GCGATAGAAAATGTAAAAGCCGAGATCCAGGCGAAGGAAGGAATTCCTCCTCATCAGCAA 8162370 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || | || || | || || ||||| || | || | | || | ||| Sbjct 8162371 AGGCTGGTCCTTGCTGGCAGGCAACTGGAAGACGGGCGTACATTGTCTGACCACAACCCT 8162430 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| || || | || | ||| || | ||||||| Sbjct 8162431 CAAAAGGAGTCCGCTCTTCCTCTCGTGTGGAGACTC 8162466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203626494570066