Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1626 100 2e-16 >seq1626 Length=1472199 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||| || || | | || ||||| ||||| | |||||||| | ||| Sbjct 526971 ATGGCTCTGCCTCCCTGCCATGCCCTCTGCCAGTTCTACGTGGTGAACGGTGAGCTGTCC 527030 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||||||||| || |||||||| || || || ||||||||||| | Sbjct 527031 TGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTGGGTGTGCCCTTCAACATTGCCAGC 527090 Query 19092 TATGCACTTCTTACCTACAT 19111 || || || || |||||||| Sbjct 527091 TACGCCCTGCTCACCTACAT 527110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399493448974515