Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1626 82.4 5e-11 >seq1626 Length=1472199 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||| ||||||||||||||||| || || ||||| || || | || ||||||||| Sbjct 523359 TATTCTGCCCCAAAATGCCTCCATTGAAAGCCGTAAACTGGGCCTAAATCCCCTTCTTCT 523300 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || || |||| || || | || || || | || ||||| |||||||| || | | Sbjct 523299 CTGGCAGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCATCCCAGATTTTC 523240 Query 97522 ACACC 97526 || || Sbjct 523239 ACTCC 523235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346774841326190