Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1626 98.7 9e-16 >seq1626 Length=1472199 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | |||| |||||||||||||| || || || |||| ||| Sbjct 527119 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACACCCAGGCCC 527060 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 ||||||||||| ||||| |||||||| ||||| |||||||||| | || || || || Sbjct 527059 ATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 527000 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || | || ||||| || || ||||| Sbjct 526999 CAGAGGGCATGGCAGGGAGGCAGAGCCAT 526971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441360844314280