Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1613 84.2 2e-11 >seq1613 Length=7518837 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7389283 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7389224 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7389223 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7389164 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7389163 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTC 7389104 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7389103 ACGAAAATCTGCAT 7389090 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7389511 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7389452 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7389451 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7389392 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7389391 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTTCCGGTCAGGGTCTTC 7389332 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7389331 ACGAAAATCTGCAT 7389318 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7389739 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7389680 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7389679 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7389620 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7389619 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTTCCGGTCAGGGTCTTC 7389560 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7389559 ACGAAAATCTGCAT 7389546 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7389967 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7389908 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7389907 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7389848 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7389847 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTC 7389788 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7389787 ACGAAAATCTGCAT 7389774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7390195 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7390136 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7390135 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7390076 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7390075 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTC 7390016 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7390015 ACGAAAATCTGCAT 7390002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7390423 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7390364 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7390363 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7390304 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7390303 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTC 7390244 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7390243 ACGAAAATCTGCAT 7390230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 7390651 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 7390592 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 7390591 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 7390532 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 7390531 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTC 7390472 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 7390471 ACGAAAATCTGCAT 7390458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496248957492240