Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1408 89.7 9e-13 >seq1408 Length=2444343 Score = 89.7 bits (98), Expect = 9e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || || ||||| || | ||| || ||||||||||| |||||||| | Sbjct 1486494 ATCTTCCATTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCCT 1486553 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| ||||||||| || ||||| | | ||||| || ||||| || Sbjct 1486554 ATCCTGGATCTTGGCCTTTATATTTTCTATTGTATCCTAGGGTTCAACCTCGAGAGTAAT 1486613 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || ||| | | || || ||||| || Sbjct 1486614 GGTCTTCCCCGTAAGGGTTGTCATGAAAATCTGCATCTT 1486652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899630030611440