Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq247 87.8 2e-12 >seq247 Length=4782322 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| |||||| || || || || ||||||||||| ||| ||||||| ||||| |||||| Sbjct 396315 TCCTCTGGAAAGTCCCATCCAGTGCGGCCACGATCACGGTCTTCCCGGCGTTGGCCATGG 396374 Query 43927 CCTCGCAGAACTCCACTAGGTCG 43949 |||||| ||||||||| | |||| Sbjct 396375 CCTCGCTGAACTCCACGATGTCG 396397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476028705223160