Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1564 91.5 3e-13 >seq1564 Length=1685133 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || ||||| || |||||||| || | ||| Sbjct 1484821 TGGTGGTACTTTGTGTCTAAAGGAGTGGAGTATTTAGACACGGTGTTTTTTATCTTGAGG 1484880 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || ||||| || || || || ||||||||||| | ||| |||||||| || Sbjct 1484881 AAGAAAAACAATCAAGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 1484940 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| | ||||| || || Sbjct 1484941 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACA 1484975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903386728849120