Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1020 82.4 1e-10 >seq1020 Length=3688603 Score = 82.4 bits (90), Expect = 1e-10 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || || || |||| |||||||| |||| ||| | || ||||| || Sbjct 997948 CTCATCTTTGCTGGTATATTCTACTATTTCTGTGCATAGATTGCTGCATTTGATCGTTCC 998007 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| |||||||||||| || || | ||| |||||||||||||| || || || Sbjct 998008 CAGGTTCTGCTGGTTACTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACC 998067 Query 111385 CGTCTCCGTCTGTGA 111399 ||||| ||||| || Sbjct 998068 TGTCTCTGTCTGAGA 998082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628014988183200