Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 >seq8 Length=94057673 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||| || || | | || ||||| ||||| | |||||||| | ||| Sbjct 41189153 ATGGCTCTGCCTCCCTGCCATGCCCTCTGCCAGTTCTACGTGGTGAACGGTGAGCTGTCC 41189212 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||||||||| || |||||||| || || || ||||||||||| | Sbjct 41189213 TGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTGGGTGTGCCCTTCAACATTGCCAGC 41189272 Query 19092 TATGCACTTCTTACCTACAT 19111 || || || || |||||||| Sbjct 41189273 TACGCCCTGCTCACCTACAT 41189292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399457077880665