Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq16 475 4e-129 seq8 194 2e-44 seq5 183 4e-41 >seq16 Length=87365405 Score = 475 bits (526), Expect = 4e-129 Identities = 673/941 (72%), Gaps = 9/941 (1%) Strand=Plus/Minus Query 176313 CCATGTTACAAAAGTGACACTACGAGACTAGCAGCTCAGGTGGTACCCGCCCTGTATCTG 176372 |||||| | |||| ||| | || || || || ||| | | ||| | |||||| Sbjct 40490969 CCATGTGAAAAAATCAACATCAAGATGCTGGCGGCCCAGTTCCTGCCCCCACTGTATTCT 40490910 Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || ||| | | |||| || |||||||| | | |||||| | || ||| || |||| Sbjct 40490909 CTGGTGGTCGTGATTGGTCTGCTGGGCAATCTGATGGTGGTGGTGATCCTCACAAAATAC 40490850 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | || | | || ||||| || ||||| || |||||||| ||||||||||| Sbjct 40490849 AAGAGGCTCCGGATTATGACCAACATCTTCCTGTTCAATTTGGCAATTTCTGACTTGCTC 40490790 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552 |||||||| ||| ||||||| ||||| |||||| || | | || || ||| |||| Sbjct 40490789 TTTCTTTTCACTCTGCCATTCTGGATTCACTATGTTTGGCGGGAT---GAGTGGGTTTTT 40490733 Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612 || | | ||||||| | |||| || | ||||||| | |||||||| || || Sbjct 40490732 GGCCATCACATGTGTAAGTTCCTCATTGGGCTTTGTTACACGGGCTTGTACAGCGAGATC 40490673 Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 176672 |||| |||||||||| | || ||||| ||||||| || | ||| | ||||| ||| Sbjct 40490672 TTTTTCATCATCCTGTTGACGCTAGACCGGTATCTGGCCATCGTCCACGCTGTGTTTGCC 40490613 Query 176673 TTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCA 176732 | | | || || || | |||||| | ||| |||| | |||||| |||||| Sbjct 40490612 CTTCGAACCCGGACCGTCACTTTTGGCATCATAACCAGTGTCTTCACCTGGGGCCTGGCA 40490553 Query 176733 GGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT 176792 ||| | |||||||||||||| |||| ||||| |||||| || |||| | | Sbjct 40490552 GGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGGGTTCCAAGAGGAATTTGGTCAGTAT 40490493 Query 176793 CAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCA 176852 || ||||| ||||||||| | |||| | |||| | | |||| ||| Sbjct 40490492 GTCTGCCTTCCTTTCTACCCAGAAGCAGCAGAAAATATCTGGAAGAGTACCCATGTTCTG 40490433 Query 176853 AAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTA 176912 | ||| ||| || |||||| | ||||| |||||||||||||||||||||||| | | Sbjct 40490432 AGAATGAATATCTTGAGTCTCGCTCTGCCTTTGCTCATTATGGCTGTCTGCTACTCAGGA 40490373 Query 176913 ATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATC 176972 || || | || |||| |||| | || | |||||| ||||||||||||||| ||||||| Sbjct 40490372 ATCATTAAAACACTGCTGAGATGTCCTAACAAGAAAAAGTACAAGGCCATCCGGCTCATT 40490313 Query 176973 TTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTG 177032 |||||||||||||||| || ||| ||||| ||| |||| |||||| | |||||| | | Sbjct 40490312 TTTGTCATCATGGTGGTCTTTTTCGTTTTCTGGGCACCTTACAACCTGGTTCTCTTTTTC 40490253 Query 177033 TCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTGAGCAGTAACTTGGACA 177090 || || ||||| ||||| | ||| ||| || ||| || ||||| | |||||| Sbjct 40490252 TCCACTTTTCAAACAACCTTCCTTGGGACCAGCTGTGATCA--GAGCAAACAGCTGGACA 40490195 Query 177091 TGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCT 177150 |||| |||||| | ||| | | | |||||||| ||||| || ||||||| ||||||| Sbjct 40490194 TGGCCCTGCTGGTGACAGAGATGATCGCCTACACGCACTGCTGTGTCAACCCTGTGATCT 40490135 Query 177151 ACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTG 177209 |||| || || || |||| ||| |||||| |||| ||||||| |||||||| |||||| Sbjct 40490134 ACGCATTTGTTGGCGAGAGGTTCCAGAAGA-ACCTCCACCACTTTTTCCACACGTACGTG 40490076 Query 177210 GCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250 ||||||||||| ||||| |||||||| ||||| || |||| Sbjct 40490075 GCCATCTACCTGTGCAAATACATCCCATTCCTTCCTAGTGA 40490035 Score = 475 bits (526), Expect = 4e-129 Identities = 673/941 (72%), Gaps = 9/941 (1%) Strand=Plus/Minus Query 9427 CCATGTTACAAAAGTGACACTACGAGACTAGCAGCTCAGGTGGTACCCGCCCTGTATCTG 9486 |||||| | |||| ||| | || || || || ||| | | ||| | |||||| Sbjct 40490969 CCATGTGAAAAAATCAACATCAAGATGCTGGCGGCCCAGTTCCTGCCCCCACTGTATTCT 40490910 Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || ||| | | |||| || |||||||| | | |||||| | || ||| || |||| Sbjct 40490909 CTGGTGGTCGTGATTGGTCTGCTGGGCAATCTGATGGTGGTGGTGATCCTCACAAAATAC 40490850 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | || | | || ||||| || ||||| || |||||||| ||||||||||| Sbjct 40490849 AAGAGGCTCCGGATTATGACCAACATCTTCCTGTTCAATTTGGCAATTTCTGACTTGCTC 40490790 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666 |||||||| ||| ||||||| ||||| |||||| || | | || || ||| |||| Sbjct 40490789 TTTCTTTTCACTCTGCCATTCTGGATTCACTATGTTTGGCGGGAT---GAGTGGGTTTTT 40490733 Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726 || | | ||||||| | |||| || | ||||||| | |||||||| || || Sbjct 40490732 GGCCATCACATGTGTAAGTTCCTCATTGGGCTTTGTTACACGGGCTTGTACAGCGAGATC 40490673 Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 9786 |||| |||||||||| | || ||||| ||||||| || | ||| | ||||| ||| Sbjct 40490672 TTTTTCATCATCCTGTTGACGCTAGACCGGTATCTGGCCATCGTCCACGCTGTGTTTGCC 40490613 Query 9787 TTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCA 9846 | | | || || || | |||||| | ||| |||| | |||||| |||||| Sbjct 40490612 CTTCGAACCCGGACCGTCACTTTTGGCATCATAACCAGTGTCTTCACCTGGGGCCTGGCA 40490553 Query 9847 GGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT 9906 ||| | |||||||||||||| |||| ||||| |||||| || |||| | | Sbjct 40490552 GGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGGGTTCCAAGAGGAATTTGGTCAGTAT 40490493 Query 9907 CAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCA 9966 || ||||| ||||||||| | |||| | |||| | | |||| ||| Sbjct 40490492 GTCTGCCTTCCTTTCTACCCAGAAGCAGCAGAAAATATCTGGAAGAGTACCCATGTTCTG 40490433 Query 9967 AAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTA 10026 | ||| ||| || |||||| | ||||| |||||||||||||||||||||||| | | Sbjct 40490432 AGAATGAATATCTTGAGTCTCGCTCTGCCTTTGCTCATTATGGCTGTCTGCTACTCAGGA 40490373 Query 10027 ATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATC 10086 || || | || |||| |||| | || | |||||| ||||||||||||||| ||||||| Sbjct 40490372 ATCATTAAAACACTGCTGAGATGTCCTAACAAGAAAAAGTACAAGGCCATCCGGCTCATT 40490313 Query 10087 TTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTG 10146 |||||||||||||||| || ||| ||||| ||| |||| |||||| | |||||| | | Sbjct 40490312 TTTGTCATCATGGTGGTCTTTTTCGTTTTCTGGGCACCTTACAACCTGGTTCTCTTTTTC 40490253 Query 10147 TCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTGAGCAGTAACTTGGACA 10204 || || ||||| ||||| | ||| ||| || ||| || ||||| | |||||| Sbjct 40490252 TCCACTTTTCAAACAACCTTCCTTGGGACCAGCTGTGATCA--GAGCAAACAGCTGGACA 40490195 Query 10205 TGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCT 10264 |||| |||||| | ||| | | | |||||||| ||||| || ||||||| ||||||| Sbjct 40490194 TGGCCCTGCTGGTGACAGAGATGATCGCCTACACGCACTGCTGTGTCAACCCTGTGATCT 40490135 Query 10265 ACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTG 10323 |||| || || || |||| ||| |||||| |||| ||||||| |||||||| |||||| Sbjct 40490134 ACGCATTTGTTGGCGAGAGGTTCCAGAAGA-ACCTCCACCACTTTTTCCACACGTACGTG 40490076 Query 10324 GCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364 ||||||||||| ||||| |||||||| ||||| || |||| Sbjct 40490075 GCCATCTACCTGTGCAAATACATCCCATTCCTTCCTAGTGA 40490035 Score = 118 bits (130), Expect = 1e-21 Identities = 583/909 (64%), Gaps = 23/909 (3%) Strand=Plus/Plus Query 9460 GCTCAGGTGGTACCCGCCCTGTA-TCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATAT 9518 || ||| || | ||| ||||||| ||| || |||||| || |||| || | ||||| || Sbjct 40532606 GCCCAGCTGCTGCCCCCCCTGTACTCT-CTGGTGTTTGTCATTGGCCTGGTCGGCAACAT 40532664 Query 9519 CTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACT 9578 | | ||||| | | |||| ||||| || | |||||| | || | ||| | || Sbjct 40532665 CCTGGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGTATGACCAGCATCTACCT 40532724 Query 9579 GTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA 9638 | ||| |||| || |||||| |||| || || || || |||| || ||||| |||| Sbjct 40532725 TCTCAACCTGGCCATTTCTGACCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACTA 40532784 Query 9639 TATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGT 9698 || || | || | ||| ||| ||| | | |||||||| ||||| || | Sbjct 40532785 TAAGC---TGAAGGATAACTGGGTTTTCGGTGATGGCTTGTGTAAATTGCTCTCAGGGCT 40532841 Query 9699 GTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTA 9758 | |||| |||||||| || || ||| |||||||||||| || | |||||||| Sbjct 40532842 TTACTACACAGGCTTGTACAGCGAGATCCTTTTCATCATCCTGCTGACCATCGACAGGTA 40532901 Query 9759 TCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGT 9818 || || | ||| |||| || |||| || || | || || ||||| || || || Sbjct 40532902 CCTGGCCATCGTCCATGCCGTGTCTGCCCTGCGGGCCCGGACTGTCACCTGGGGTATCGT 40532961 Query 9819 TACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTC-TTTC 9877 ||| | | |||||| | ||||| ||| ||| |||||| || | | |||| Sbjct 40532962 GACCAGCATCATCACCTGGGTCCTGGCCCTCTTGGCTTCCATCCCTGGCTTGTGCTTTTC 40533021 Query 9878 ATGGACACCAAGATGACAATGGTAGGGTT-CA-GTGTGATCCTTACTACC---CAGAGAT 9932 ||| ||| | | ||| | || || || || | | | || | || | Sbjct 40533022 CAAGAC-CCAGG--GGGAATTCTCTCATTACACCTGCAGTCTTCATTTCCCTTCTGA-AA 40533077 Query 9933 GTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTT 9992 | || ||| | |||| | ||| | | ||| ||| || ||| | || |||| Sbjct 40533078 GCCT--AAAAGAGTGGAAACAGTTCCAGGCTCTGAAGATGAACATCTTAGGGCTGGTTTT 40533135 Query 9993 GCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCC 10052 ||||||||| | ||| |||||||| | ||||| | | ||| | || || || Sbjct 40533136 GCCTCTGCTGGTCATGATCATCTGCTACACAGGGATTATAAAGATTCTGCTCAGACGGCC 40533195 Query 10053 CAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGT 10112 | |||||||| || |||||| | || || |||||||||||| | || || | Sbjct 40533196 AAATGAGAAGAAGGCAAAAGCCATCCGTCTGATTTTTGTCATCATGATCATCTTCTTCCT 40533255 Query 10113 TTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC-CCTTCTTA 10171 |||||||| || ||||| | | | | ||| ||||| | ||| ||| || Sbjct 40533256 GTTTTGGACCCCTTACAATCTGACCATGTTTGTTTCT-GCTTTC-CAAAACTTCTTTTTC 40533313 Query 10172 ACC--TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 10229 ||| || |||||| ||||| | ||||| |||| | | | ||| | | Sbjct 40533314 ACCAATG-AGTGTGAGCAGAGCAAACAGCTGGACCTGGCCATACAAGTGACAGAGGTGAT 40533372 Query 10230 AGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAG 10289 |||||||| ||||| ||| ||||||| |||||||||| || || || ||| ||| | Sbjct 40533373 CGCCTACACGCACTGCTGCGTCAACCCTGTGATCTACGTCTTTGTCGGCCAGAGGTTCCG 40533432 Query 10290 AAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCC 10349 || ||||| ||| || ||||||| |||| || | |||| |||| |||| Sbjct 40533433 AAAGTACCTGCGCCAGTTGTTCCACAGGCTCGTGACCGTGCACCTGGCTAAGTGGCTCCC 40533492 Query 10350 CTTCCTGTC 10358 |||||| || Sbjct 40533493 CTTCCTCTC 40533501 Score = 118 bits (130), Expect = 1e-21 Identities = 583/909 (64%), Gaps = 23/909 (3%) Strand=Plus/Plus Query 176346 GCTCAGGTGGTACCCGCCCTGTA-TCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATAT 176404 || ||| || | ||| ||||||| ||| || |||||| || |||| || | ||||| || Sbjct 40532606 GCCCAGCTGCTGCCCCCCCTGTACTCT-CTGGTGTTTGTCATTGGCCTGGTCGGCAACAT 40532664 Query 176405 CTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACT 176464 | | ||||| | | |||| ||||| || | |||||| | || | ||| | || Sbjct 40532665 CCTGGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGTATGACCAGCATCTACCT 40532724 Query 176465 GTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA 176524 | ||| |||| || |||||| |||| || || || || |||| || ||||| |||| Sbjct 40532725 TCTCAACCTGGCCATTTCTGACCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACTA 40532784 Query 176525 TATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGT 176584 || || | || | ||| ||| ||| | | |||||||| ||||| || | Sbjct 40532785 TAAGC---TGAAGGATAACTGGGTTTTCGGTGATGGCTTGTGTAAATTGCTCTCAGGGCT 40532841 Query 176585 GTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTA 176644 | |||| |||||||| || || ||| |||||||||||| || | |||||||| Sbjct 40532842 TTACTACACAGGCTTGTACAGCGAGATCCTTTTCATCATCCTGCTGACCATCGACAGGTA 40532901 Query 176645 TCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGT 176704 || || | ||| |||| || |||| || || | || || ||||| || || || Sbjct 40532902 CCTGGCCATCGTCCATGCCGTGTCTGCCCTGCGGGCCCGGACTGTCACCTGGGGTATCGT 40532961 Query 176705 TACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTC-TTTC 176763 ||| | | |||||| | ||||| ||| ||| |||||| || | | |||| Sbjct 40532962 GACCAGCATCATCACCTGGGTCCTGGCCCTCTTGGCTTCCATCCCTGGCTTGTGCTTTTC 40533021 Query 176764 ATGGACACCAAGATGACAATGGTAGGGTT-CA-GTGTGATCCTTACTACC---CAGAGAT 176818 ||| ||| | | ||| | || || || || | | | || | || | Sbjct 40533022 CAAGAC-CCAGG--GGGAATTCTCTCATTACACCTGCAGTCTTCATTTCCCTTCTGA-AA 40533077 Query 176819 GTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTT 176878 | || ||| | |||| | ||| | | ||| ||| || ||| | || |||| Sbjct 40533078 GCCT--AAAAGAGTGGAAACAGTTCCAGGCTCTGAAGATGAACATCTTAGGGCTGGTTTT 40533135 Query 176879 GCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCC 176938 ||||||||| | ||| |||||||| | ||||| | | ||| | || || || Sbjct 40533136 GCCTCTGCTGGTCATGATCATCTGCTACACAGGGATTATAAAGATTCTGCTCAGACGGCC 40533195 Query 176939 CAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGT 176998 | |||||||| || |||||| | || || |||||||||||| | || || | Sbjct 40533196 AAATGAGAAGAAGGCAAAAGCCATCCGTCTGATTTTTGTCATCATGATCATCTTCTTCCT 40533255 Query 176999 TTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC-CCTTCTTA 177057 |||||||| || ||||| | | | | ||| ||||| | ||| ||| || Sbjct 40533256 GTTTTGGACCCCTTACAATCTGACCATGTTTGTTTCT-GCTTTC-CAAAACTTCTTTTTC 40533313 Query 177058 ACC--TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 177115 ||| || |||||| ||||| | ||||| |||| | | | ||| | | Sbjct 40533314 ACCAATG-AGTGTGAGCAGAGCAAACAGCTGGACCTGGCCATACAAGTGACAGAGGTGAT 40533372 Query 177116 AGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAG 177175 |||||||| ||||| ||| ||||||| |||||||||| || || || ||| ||| | Sbjct 40533373 CGCCTACACGCACTGCTGCGTCAACCCTGTGATCTACGTCTTTGTCGGCCAGAGGTTCCG 40533432 Query 177176 AAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCC 177235 || ||||| ||| || ||||||| |||| || | |||| |||| |||| Sbjct 40533433 AAAGTACCTGCGCCAGTTGTTCCACAGGCTCGTGACCGTGCACCTGGCTAAGTGGCTCCC 40533492 Query 177236 CTTCCTGTC 177244 |||||| || Sbjct 40533493 CTTCCTCTC 40533501 >seq8 Length=94057673 Score = 194 bits (214), Expect = 2e-44 Identities = 140/162 (86%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 41189313 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 41189254 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| | |||||||||||||||||| ||||| ||| | || Sbjct 41189253 ACACCCAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 41189194 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||||||||| ||| |||||||| ||||| |||||| Sbjct 41189193 ACGTAGAACTGGCAGAGGGCATGGCAGGGAGGCAGAGCCATG 41189152 >seq5 Length=99680356 Score = 183 bits (202), Expect = 4e-41 Identities = 135/157 (86%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||||||| | |||||| || ||||||||||||||||||||||| | ||| Sbjct 2989649 CAGCGCCGCAGCCTCACTCGGAGGGTCTTCAGCTTTTCCCCCAGGGAGTTCACGTGCTCC 2989708 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | || ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2989709 TTGAT---GTCTGGGCCGTGGTTCTCAGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 2989765 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 2989766 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 2989802 Score = 127 bits (140), Expect = 2e-24 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 ||||||||||||||| || ||||| ||||| ||||||||||| ||||||||||||||||| Sbjct 2987385 TCAGTTTTTCATCTTCGTTGTCATATAGGCTTCTATGTAGTTGATGAAGATGTCAAACTC 2987444 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| ||||| || ||||||| Sbjct 2987445 ACTCATGGCTTTGTAGACACCTTTCTCTTGGAGCT 2987479 Score = 125 bits (138), Expect = 8e-24 Identities = 138/180 (77%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| ||||||||||||||||| | |||||| |||||||||||||||||||| Sbjct 2990952 AAAGAAAGTCTTCACCCTGCTGAAGGCGGCTCGGAGCTCATGGAGCATGTGGGGCAGGCT 2991011 Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415 ||| || || || || |||| || | |||||| || | | | ||| | || Sbjct 2991012 GGTTGGGAA-GTGGGTGCAGCTGTTCTCAGACTGGGTGCCCCGGTCTCGGCTGGCTCCCA 2991070 Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGCTAA--TCTGCC 138473 |||||||||||| |||||| |||| ||||| | ||| ||| ||||||| | |||||| Sbjct 2991071 CCCCGGCCAGGAAGACCAGGTAACATAGCAGTGCTGCGCTGGGCATGGCTGAGCTCTGCC 2991130 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/71 (90%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 138236 CCTTAAAGTCTTCCAGCAGGGACCCGTCCAGCAACATGTTGTCCAGCTGGTCCTTCAT-- 138293 |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 2990070 CCTTAAAGTCCTCCAGCAGGGACCCGTTCAACAACATGTTGTCCAGCTGGTCCTTCATTT 2990129 Query 138294 -CTGAAAGAAG 138303 ||| |||||| Sbjct 2990130 GCTGTAAGAAG 2990140 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| |||||||| ||||||||||||||||| |||||||||||||| || |||||||| || Sbjct 2988572 CTTACTGAAGGCACTCTTCACCTGCTCCACTGCCTTGCTCTTATTTTCACAGGGCAGAAA 2988631 Query 138075 TC 138076 || Sbjct 2988632 TC 2988633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590005717873480