Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5 123 2e-23 >seq5 Length=99680356 Score = 123 bits (136), Expect = 2e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 2989791 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCCCAGGCT 2989732 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| || || ||||| || |||||||| |||||||||||||| Sbjct 2989731 GAGAACCACGGCCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAGCTGAAGACC 2989672 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || | | ||||| ||||| Sbjct 2989671 CTCCGAGTGAGGCTGCGGCGCTG 2989649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430003889707544