Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 5e-13 >seq8 Length=94057673 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 24467895 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 24467954 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 24467955 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 24468014 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | ||| || || ||||| || || Sbjct 24468015 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATCGTCTTCCCGGTCAGGGTCTTC 24468074 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 24468075 ACGAAAATCTGCAT 24468088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| ||||| || || || |||| Sbjct 24468123 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCG 24468182 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 24468183 AAGATGAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 24468242 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || || ||||| || || Sbjct 24468243 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCCCGTCAGGGTCTTC 24468302 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 24468303 ACGAAAATCTGCAT 24468316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496202618990640