Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq14 313 2e-79 seq20 176 3e-38 seq7 118 8e-21 seq11 109 4e-18 seq27 95.1 9e-14 seq25 86.0 5e-11 >seq14 Length=93904894 Score = 313 bits (346), Expect = 2e-79 Identities = 951/1459 (65%), Gaps = 18/1459 (1%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||||| ||||| ||||||||||| | |||||| ||||||||||| ||||| || Sbjct 1981403 GCAGAGACATTGAGAATGCCATTGGCATCAATATCAAAAGTGACTTCAATCTGAGGAACA 1981344 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || || || ||| | | ||| | || || ||| ||||| || Sbjct 1981343 CCACGAGGGGCTGGAGGTATGCCTGTGAGTTCAAACTTGCCAAGCAGATTGTTATCCTTG 1981284 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | ||||| || ||| || || || ||| || || || || || Sbjct 1981283 GTCATGGCATGCTCACCTTCATAAACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAG 1981224 Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498 || || || | | | || |||||| || ||||| | | || | ||| Sbjct 1981223 GTAGTGAAGGTTTGTGTCTGCTTGGTAGGAATCGTAGTGTTGCACTTTATGAGCACAGTC 1981164 Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558 || | ||||| || ||||| | ||||| ||||||||||||||||| | || | | | Sbjct 1981163 ATGACTCCACCAGCAGTTTCCATGCCAAGGGAAAGAGGAGTGACATCCAACAGCAGCAAA 1981104 Query 517559 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618 | ||||| |||||| | | ||| || || ||||| || | ||| |||||||| Sbjct 1981103 TCTTGAACATTTTCAGATTTGTCTCCAGATAGGATGGCTGCCTGGACAGCTGCACCATAA 1981044 Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 517678 |||||||| |||||||| || | | | ||| |||| ||| |||||||| || | Sbjct 1981043 GCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAGAAGTCCTGT 1980984 Query 517679 AGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737 ||||||| ||| | ||| || || | | || || || |||| ||||| ||||| | Sbjct 1980983 AGAAGTT-TCTGAATCTTGGGGATGCAGGTAGAACCACCCACTAGGACAATATCATGAAT 1980925 Query 517738 CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCT 517797 ||| | || ||||| || | |||| | |||| || || || || || | | Sbjct 1980924 CTGGGTCTTGTCCAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAGGGTGCCACG 1980865 Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 517857 |||| ||| | | | |||||| ||| || | |||| || | || | || || Sbjct 1980864 GAACAGGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATAGAAGTCGAT 1980805 Query 517858 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 517917 |||||| | | ||||||| ||||| | | || || |||||| || | ||| || Sbjct 1980804 TCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTAGAAGAGAGAGTACGCTT 1980745 Query 517918 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGATTCAAAT 517973 |||||||||||| | || | || | ||| | ||| || | || | |||| | Sbjct 1980744 AGCACGTTCACAAGAAGTGCGCAGGCGTCGGACGGCCCTCTTGTTCTCACTGATG----T 1980689 Query 517974 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAA 518031 | | |||| || | |||||| ||| | | | | ||| | || | | || ||||| Sbjct 1980688 CCTTCTTATGCTTGCGCTTGAATTCTGCGATAAA--ATGGTTGACCATTCAGTTGTCAAA 1980631 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 ||||| || | || | || | ||| | |||| | | || | || | ||||||||| Sbjct 1980630 GTCTTCTCCACTTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGATTCCATCTTC 1980571 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 || ||| | | | ||||| || ||||| || | ||||| | ||||| || | Sbjct 1980570 AATAGAGAGGATTGACACATCGAAAGTGCCACCTCCTAAGTCAAAGGTCAGTACGTTTCT 1980511 Query 518152 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 || | ||||| || | ||| || |||| ||||||||||||||| ||||| || Sbjct 1980510 CTCAGCTCCAACCTTTTTGTCTAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGAT 1980451 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||||| | ||||| ||||||||||| |||| |||||||| || || || | || || Sbjct 1980450 GATTCTAAGTACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGA 1980391 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || ||||| || ||||| || || | ||| |||| || || || |||| || || Sbjct 1980390 GTCATTAAAGTAAGCAGGTACTGTGACAACAGCATTGGTAACAGTCTTCCCAAGGTAGGC 1980331 Query 518332 GCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA-ATATT 518390 || ||| ||||| || | |||| ||| || || | | ||||| | | | | Sbjct 1980330 TTCTGTGATTTCCTTCATCTTTGTCAAAACCATAGAAGACACCTCCTCTGGATAGAAACT 1980271 Query 518391 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTT 518450 ||| | ||| ||| ||||| | | || | || |||| | || Sbjct 1980270 TTTTGTCTCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCACCACCA 1980212 Query 518451 TAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATT 518509 | || ||||| | |||||||| || || ||| ||| | |||||| | ||||| Sbjct 1980211 TGAAGGGCCAATGCTTCATATCAGACTGGACAACAGCATCA-TCAAATCTACGTCCAATC 1980153 Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569 | ||||| |||||||||| || ||||| || || ||||| |||| | || || ||| Sbjct 1980152 AGACGTTTGGCATCAAAAACCGTGTTGGTCGGGTTCGTTGCAACTTGGTTCTTTGCAGCA 1980093 Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629 || || |||| |||| || || ||||| | ||||| ||| || || || || ||| Sbjct 1980092 TCACCGATCAATCGTTCCGTGTCAGTAAAAGCGACATAGCTTGGGGTGGTTCGGTTTCCT 1980033 Query 518630 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 518689 |||||||| || || ||||| ||||| |||| || | ||||| ||||| | || Sbjct 1980032 TGATCATTGGCTATTATTTCCACTTTTCCATGCTGGAAAACACCCACACACGAGTAGGTG 1979973 Query 518690 GTTCCTAAATCAATACCAA 518708 || || | |||||| |||| Sbjct 1979972 GTGCCAAGATCAATGCCAA 1979954 >seq20 Length=64166202 Score = 176 bits (194), Expect = 3e-38 Identities = 963/1517 (63%), Gaps = 26/1517 (2%) Strand=Plus/Plus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| || || || || || |||| ||| ||| ||||| ||| || |||||||| Sbjct 31551276 ATTGGTGATGGTGATCTTGTTGGCCTTGCCTGTGCTCTTATCCATGGCTGTTACATTAAG 31551335 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 |||||||||||| || | ||||| || || || || ||||| || ||||| | ||||| Sbjct 31551336 AATACCATTGGCGTCGATGTCAAAGGTCACCTCGATCTGAGGAACTCCTCTGGGTGCAGG 31551395 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||||| || || || ||| |||||| || || || || | | || Sbjct 31551396 GGGGATTCCAGTCAGATCAAAGCGTCCCAGCAGGTTGTTGTCCCGCGTCATGGCCCTCTC 31551455 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 517452 |||||| | | ||||| || | | || |||||||| || || ||||| | ||| Sbjct 31551456 GCCCTCGTAGACCTGGATCAATACCCCTGGCTGGTTATCTGAGTAGGTGGTAAAGA-TCT 31551514 Query 517453 GGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 | | | || || || || | ||| | | || | ||||| | || || | Sbjct 31551515 GCGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATCAGGACAGTCATCACGCCCCCCG 31551574 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 | || || || || || || || |||| ||||| | | | | | || | |||| Sbjct 31551575 CCGTCTCCAACCCCAGCGACAGGGGAGCCACATCCAACAAAAGCAGGTCCTGTACCTTTT 31551634 Query 517572 CATCAGTTT-GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 || | | | ||| ||| ||| ||||| || | ||||| ||||| || || || ||| Sbjct 31551635 CAGACTTGTCGCCCATCAA-AATGGCTGCCTGTACTGCAGCCCCATAGGCCACCGCCTCA 31551693 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || || | | | || || | ||||| || | | || || ||| Sbjct 31551694 TCGGGGTTGATGCTCTTGTTGAGATCACGGCCATTAAAGTAGTCCTGCAGCAGCC-TCTG 31551752 Query 517691 ACCTT-AGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | ||| ||| ||||| | || || || ||||| ||||| ||||| | | | ||||| Sbjct 31551753 AACTTTAGGGATACGGGTGGAGCCCCCTACTAAAACAATGTCATGGATTTTAGCCTTATC 31551812 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC-TAAACAAGTCTG 517808 || || | ||| | | | || || || || || ||| |||| |||||| ||||| Sbjct 31551813 CATCTTCGCATCACGAAGAGCCTTCTCCACAGGCTCCAGAGT-GCTCCTAAACAGGTCTG 31551871 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 ||| | ||||| || ||||| || || ||| | || || || || ||||| || Sbjct 31551872 CACACAACTCTTCAAACCGGGCTCTGGT--GATGGACGTGTAGAAGTCGATGCCTTCAAA 31551929 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | ||||||| ||| | | | || || || || || | | || || | || Sbjct 31551930 AAGTGAATCAATTTCCAAGTTGGCCTGGGTGCTGGATGACAGGGTCCTCTTGGCCCTCTC 31551989 Query 517927 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 517982 || || || | || | | | || |||| | |||| |||| || | || | Sbjct 31551990 GCAGGCGGTGCGCAGCCGCCTCACAGCCCGCTTGTTCTGACTGATG----TCCTTCTTGT 31552045 Query 517983 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 518042 ||| |||||||| ||||| ||| | | ||||| | || ||||| || || || | Sbjct 31552046 GTTTCCTCTTGAACTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAAAGTCCTCTCCAC 31552105 Query 518043 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 518102 ||| | || | || | || || |||| | |||| ||||| || | | || | Sbjct 31552106 CCAGGTGGGTGTCCCCAGCTGTGGCCTTTACCTCAAAAATCCCATCATCTATGGTCAGGA 31552165 Query 518103 GAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT--TGTC 518160 | |||||| || || ||||||| |||||| || || |||| | ||| || | Sbjct 31552166 CGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGAACATGTCTCTCTCCCTGAC 31552225 Query 518161 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 || ||| | | ||| ||||| |||| |||||||| || ||||| || |||||||| | Sbjct 31552226 CTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGGTTCGTTGATAATTCTTAG 31552283 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 ||||| ||||| ||||| |||||||| || ||||| || | ||| || || || || Sbjct 31552284 CACATTGAGACCCGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGAGAGTCATTGAA 31552343 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGT 518340 ||| || || ||||| || || |||| || || | || | | |||| || || Sbjct 31552344 ATAAGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCCAAAAAAGCCTCAGCAGT 31552403 Query 518341 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT-T 518399 | ||||| ||| | | | ||| || ||||||| || ||| | | |||| | | Sbjct 31552404 CTCCTTCATCTTAGTCAGCACCATAGAAGAAATTTCCTCAGGGTAGAAA-GCTTTTTTCT 31552462 Query 518400 CATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCC 518459 | || || || || | | || || | |||| || |||| ||| |||| Sbjct 31552463 CCCCTTTGTAGGACACCATTACCTTGGGCTTGCCTTCGTCATTGATTACTTGAAAAGGCC 31552522 Query 518460 AGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 518519 | |||||| |||||||| || | |||||||| | || || || | ||||| | Sbjct 31552523 AAAGTTTCATGTCTGATTGCACTACAGGATCATTAAATTTCCTGCCGATCAGACGTTTGG 31552582 Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 ||||||| | ||| || ||||| || || | || | ||||||||||| ||||| | Sbjct 31552583 CATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCTGCATCCCCAATGA 31552642 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 | | || || || || || | || || ||||| ||||| || || || || || | Sbjct 31552643 GCCGCTCGGTGTCCGTGAAGGCCACGTAGCTGGGAGTGGTGCGGTTGCCCTGGTCGTTGG 31552702 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 | || || || || || || | || | || || || || | || || || | | Sbjct 31552703 CGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCACGAGTAGGTGGTACCCAGGT 31552762 Query 518700 CAATACCAATAGCAATT 518716 |||| ||||| || ||| Sbjct 31552763 CAATGCCAATGGCCATT 31552779 >seq7 Length=98542428 Score = 118 bits (130), Expect = 8e-21 Identities = 357/546 (65%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| |||||||| |||||||| || | | | ||| |||| ||| |||||||| Sbjct 30254038 GCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAG 30254097 Query 517670 AAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | ||||||| ||| | ||| || || || | || || || |||| ||||| Sbjct 30254098 AAGTCCTGTAGAAGTT-TCTGAATCTTGGGGATGCGGGTAGAACCACCCACTAGGACAAT 30254156 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | ||| || || ||||| || | |||| | |||| || || || || || Sbjct 30254157 ATCATGAATCTGGGACTTGTCCAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAG 30254216 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | |||| ||| | | | |||||| ||| || | |||| || | || Sbjct 30254217 GGTGCCACGGAACAGGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATA 30254276 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | || |||||||| | | ||||||| ||||| | | || || |||||| || Sbjct 30254277 GAAGTCGATTCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTAGAAGAGAG 30254336 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCTGATT 517964 | ||| |||||||||||||| || || | || | ||| | || ||| | || | | Sbjct 30254337 AGTACGCTTAGCACGTTCACAAGCAGTGCGCAGGCGTCGGACGGCCCTCTTGTTCTCACT 30254396 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | |||| || | |||||| ||| | | | | ||| | || | || Sbjct 30254397 GAT----GTCCTTCTTATGCTTGCGCTTGAATTCTGCGATAAA--ATGGTTGACCATTCG 30254450 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 || ||||| ||||| || || || | || | ||| | |||| | | || | || | Sbjct 30254451 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGAT 30254510 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||||||||| || | | | |||||| || ||||| || | ||||| || || Sbjct 30254511 TCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAGTCAAAGATCAG 30254570 Query 518143 TACATT 518148 ||| || Sbjct 30254571 TACGTT 30254576 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||| || |||| ||||||||||||||| ||||| || ||||| | ||| Sbjct 30254682 TTTTTGTCTAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA 30254741 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||||||||| |||| |||||||| || || || | || || || ||||| || Sbjct 30254742 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAGTAA 30254801 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| || || | ||| |||| Sbjct 30254802 GCAGGTACTGTGACAACAGCAT 30254823 Score = 93.3 bits (102), Expect = 3e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 || |||||| || ||||| || || |||||| |||| | || || ||||| || |||| Sbjct 30255614 CACCAAAAACCGTGTTGGTCGGGTTCATTGCAACTTGGTTCTTTGCGGCATCACCGATCA 30255673 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 |||| || || ||||| | ||||| || || || || || ||||||||||| | Sbjct 30255674 ATCGTTCCGTGTCAGTAAAAGCGACATAGCTCGGGGTGGTTCGGTTTCCTTGATCATTGG 30255733 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 | || ||||| ||||| |||| || | ||||| ||||| | || || || | || Sbjct 30255734 CTATTATTTCCACTTTTCCATGCTGGAAAACACCCACACACGAGTAGGTGGTGCCAAGAT 30255793 Query 518700 CAATACCAA 518708 |||| |||| Sbjct 30255794 CAATGCCAA 30255802 >seq11 Length=61308211 Score = 109 bits (120), Expect = 4e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || ||| |||| |||||||| ||||||||||| || ||| | || || ||| | Sbjct 22180224 TGTACACTTATTCTGACTGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 22180283 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||||||||| | ||||| |||||||| |||||||||||| | | |||||| | Sbjct 22180284 GTGGTTGGAAGAGACAAATATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 22180343 Query 635561 GATGCTAGTCCTAAA 635575 || ||| || |||| Sbjct 22180344 GAAGCTTCTCATAAA 22180358 >seq27 Length=39960074 Score = 95.1 bits (104), Expect = 9e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| ||||| || ||||| ||||| ||||| ||||||||| | ||| || | || || Sbjct 13373217 TGTCGTAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGATATTCGCAAAGTCAT 13373158 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 |||||| || ||||| ||| | || ||| ||||| || || ||||||||||| || || Sbjct 13373157 TCATTACGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAGATTGGTAGAGCTGGCCG 13373098 Query 367113 TGATGGA 367119 |||||| Sbjct 13373097 GGATGGA 13373091 >seq25 Length=39536964 Score = 86.0 bits (94), Expect = 5e-11 Identities = 208/309 (67%), Gaps = 22/309 (7%) Strand=Plus/Plus Query 517098 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCTTCTTCAAA 517155 |||||| ||| ||| ||| |||| || ||| ||| ||| || || | || |||| Sbjct 29075320 TTTCTAGTTCGTTTCTAGTGTCAAT-GC-GCTCTTTGAGCTTCTTGTCCTCCTCGGCAAA 29075377 Query 517156 TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT--- 517212 | | ||| || ||| ||| || ||||||| |||||| | | |||||| Sbjct 29075378 CTTCTCAGCATCATTAACCATCCTTTCAATTT---CTTCAGG---TGTCAGGCGATTTTG 29075431 Query 517213 ---ATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCAC 517266 ||| ||||| || || || || |||||| ||| ||| || | || ||||| Sbjct 29075432 GTCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGCTGTCAC 29075488 Query 517267 ATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTG 517326 |||||| ||||| |||| | ||||| ||||||||||| || |||||||| | | Sbjct 29075489 TCGAAGAATGCCATTCACATCTATCTCAAAGGTGACTTCAATCTGTGGGACCCCACGGGG 29075548 Query 517327 AGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTT 517386 |||||| || || || || || ||| ||||||| | | ||| ||||| || || Sbjct 29075549 AGCAGGAGGAATTCCAGTCAGATCAAAAGTTCCCAAAAGGTGATTGTCTTTCGTCAAGGG 29075608 Query 517387 TCGTTCACC 517395 ||||||||| Sbjct 29075609 TCGTTCACC 29075617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780344180315722