Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 2e-14 >seq3 Length=119479920 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 193214 TTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTAT 193273 ||| || || ||||| || | ||| || ||||||||||| |||||||| |||| || || Sbjct 109160539 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCGTATCCTGGAT 109160598 Query 193274 TTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACC 193333 |||| ||||||||| || ||||| | | ||||| || ||||| || || || || Sbjct 109160599 CTTGGCCTTTATATTTTCTATTGTATCCTAGGGTTCAACCTCGAGAGTGATGGTCTTCCC 109160658 Query 193334 TGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || ||||| || Sbjct 109160659 CGTAAGGGTTTTCACGAAAATCTGCATCTT 109160688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899546025381840