Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14 322 4e-82 seq20 176 3e-38 seq7 118 8e-21 seq11 113 3e-19 seq27 98.7 7e-15 seq25 86.0 5e-11 >seq14 Length=93904894 Score = 322 bits (356), Expect = 4e-82 Identities = 953/1459 (65%), Gaps = 18/1459 (1%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| ||||| ||||||||||| | |||||| ||||||||||| ||||| || Sbjct 1981403 GCAGAGACATTGAGAATGCCATTGGCATCAATATCAAAAGTGACTTCAATCTGAGGAACA 1981344 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | | || || || || ||| | | ||| | || || ||| ||||| || Sbjct 1981343 CCACGAGGGGCTGGAGGTATGCCTGTGAGTTCAAACTTGCCAAGCAGATTGTTATCCTTG 1981284 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | ||||| || ||| || || || ||| || || || || || Sbjct 1981283 GTCATGGCATGCTCACCTTCATAAACCTGAATGAGCACACCAGGCTGGTTGTCAGAGTAG 1981224 Query 281606 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 281665 || || || | | | || |||||| || ||||| | | || | ||| Sbjct 1981223 GTAGTGAAGGTTTGTGTCTGCTTGGTAGGAATCGTAGTGTTGCACTTTATGAGCACAGTC 1981164 Query 281666 ATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 281725 || | |||||||| ||||| | ||||| ||||||||||||||||| | || | | | Sbjct 1981163 ATGACTCCACCAGCAGTTTCCATGCCAAGGGAAAGAGGAGTGACATCCAACAGCAGCAAA 1981104 Query 281726 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 281785 | ||||| |||||| | | ||| || || ||||| || | ||| |||||||| Sbjct 1981103 TCTTGAACATTTTCAGATTTGTCTCCAGATAGGATGGCTGCCTGGACAGCTGCACCATAA 1981044 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 281845 |||||||| |||||||| || | | | ||| |||| ||| |||||||| || | Sbjct 1981043 GCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAGAAGTCCTGT 1980984 Query 281846 AGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904 ||||||| ||| | ||| || || | | || || || |||| ||||| ||||| | Sbjct 1980983 AGAAGTT-TCTGAATCTTGGGGATGCAGGTAGAACCACCCACTAGGACAATATCATGAAT 1980925 Query 281905 CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCT 281964 ||| | || ||||| || | |||| | |||| || || || || || | | Sbjct 1980924 CTGGGTCTTGTCCAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAGGGTGCCACG 1980865 Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 282024 |||| ||| | | | |||||| ||| || | |||| || | || | || || Sbjct 1980864 GAACAGGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATAGAAGTCGAT 1980805 Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084 |||||| | | ||||||| ||||| | | || || |||||| || | ||| || Sbjct 1980804 TCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTAGAAGAGAGAGTACGCTT 1980745 Query 282085 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCTGATTGATTCAAAT 282140 |||||||||||| | || | || | ||| | || ||| | || | |||| | Sbjct 1980744 AGCACGTTCACAAGAAGTGCGCAGGCGTCGGACGGCCCTCTTGTTCTCACTGAT----GT 1980689 Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAA 282198 | | |||| || | |||||| ||| | | | | ||| | || | | || ||||| Sbjct 1980688 CCTTCTTATGCTTGCGCTTGAATTCTGCGATAAA--ATGGTTGACCATTCAGTTGTCAAA 1980631 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 ||||| || | || | || | ||| | |||| | | || | || | ||||||||| Sbjct 1980630 GTCTTCTCCACTTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGATTCCATCTTC 1980571 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 || ||| | | | ||||| || ||||| || | ||||| | ||||| || | Sbjct 1980570 AATAGAGAGGATTGACACATCGAAAGTGCCACCTCCTAAGTCAAAGGTCAGTACGTTTCT 1980511 Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 || | ||||| || | ||| || |||| ||||||||||||||| ||||| || Sbjct 1980510 CTCAGCTCCAACCTTTTTGTCTAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGAT 1980451 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 ||||| | ||||| ||||||||||| |||| |||||||| || || || | || || Sbjct 1980450 GATTCTAAGTACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGA 1980391 Query 282439 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 || ||||| || ||||| || || | ||| |||| || || || |||| || || Sbjct 1980390 GTCATTAAAGTAAGCAGGTACTGTGACAACAGCATTGGTAACAGTCTTCCCAAGGTAGGC 1980331 Query 282499 GCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-ATATT 282557 || ||| ||||| || | |||| ||| || || | | |||||| | | | | Sbjct 1980330 TTCTGTGATTTCCTTCATCTTTGTCAAAACCATAGAAGACACCTCCTCTGGATAGAAACT 1980271 Query 282558 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTT 282617 ||| | ||| ||| ||||| | | || | || |||| | || Sbjct 1980270 TTTTGTCTCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCTGCATCATTCACCACCA 1980212 Query 282618 TAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATT 282676 | || ||||||| |||||||| || || ||| ||| | |||||| | ||||| Sbjct 1980211 TGAAGGGCCAATGCTTCATATCAGACTGGACAACAGCATCA-TCAAATCTACGTCCAATC 1980153 Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736 | ||||| |||||||||| || ||||| || || |||| |||| | || || ||| Sbjct 1980152 AGACGTTTGGCATCAAAAACCGTGTTGGTCGGGTTCGTTGCAACTTGGTTCTTTGCAGCA 1980093 Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796 || || |||| |||| || || ||||| | ||||| ||| || || || || ||| Sbjct 1980092 TCACCGATCAATCGTTCCGTGTCAGTAAAAGCGACATAGCTTGGGGTGGTTCGGTTTCCT 1980033 Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 282856 |||||||| || || ||||| ||||| |||| || | ||||| ||||| | || Sbjct 1980032 TGATCATTGGCTATTATTTCCACTTTTCCATGCTGGAAAACACCCACACACGAGTAGGTG 1979973 Query 282857 GTTCCTAAATCAATACCAA 282875 || || | |||||| |||| Sbjct 1979972 GTGCCAAGATCAATGCCAA 1979954 >seq20 Length=64166202 Score = 176 bits (194), Expect = 3e-38 Identities = 963/1517 (63%), Gaps = 26/1517 (2%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| || || || || || |||| ||| ||| ||||| ||| || |||||||| Sbjct 31551276 ATTGGTGATGGTGATCTTGTTGGCCTTGCCTGTGCTCTTATCCATGGCTGTTACATTAAG 31551335 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||||||| || | ||||| || || || || ||||| || ||||| | ||||| Sbjct 31551336 AATACCATTGGCGTCGATGTCAAAGGTCACCTCGATCTGAGGAACTCCTCTGGGTGCAGG 31551395 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || || || ||| |||||| || || || || | | || Sbjct 31551396 GGGGATTCCAGTCAGATCAAAGCGTCCCAGCAGGTTGTTGTCCCGCGTCATGGCCCTCTC 31551455 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 |||||| | | ||||| || | | || |||||||| || || ||||| | ||| Sbjct 31551456 GCCCTCGTAGACCTGGATCAATACCCCTGGCTGGTTATCTGAGTAGGTGGTAAAGA-TCT 31551514 Query 281620 GGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 | | | || || || || | ||| | | || | ||||| | || || | Sbjct 31551515 GCGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATCAGGACAGTCATCACGCCCCCCG 31551574 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 | || || || || || || || |||| ||||| | | | | | || | |||| Sbjct 31551575 CCGTCTCCAACCCCAGCGACAGGGGAGCCACATCCAACAAAAGCAGGTCCTGTACCTTTT 31551634 Query 281739 CATCAGTTT-GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 || | | | ||| ||| ||| ||||| || | ||||| ||||| || || || ||| Sbjct 31551635 CAGACTTGTCGCCCATCAA-AATGGCTGCCTGTACTGCAGCCCCATAGGCCACCGCCTCA 31551693 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 || || || | | | || || | ||||| || | | || || ||| Sbjct 31551694 TCGGGGTTGATGCTCTTGTTGAGATCACGGCCATTAAAGTAGTCCTGCAGCAGCC-TCTG 31551752 Query 281858 ACCTT-AGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | ||| ||| ||||| | || || || ||||| ||||| ||||| | | | ||||| Sbjct 31551753 AACTTTAGGGATACGGGTGGAGCCCCCTACTAAAACAATGTCATGGATTTTAGCCTTATC 31551812 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC-TAAACAAGTCTG 281975 || || | ||| | | | || || || || || ||| |||| |||||| ||||| Sbjct 31551813 CATCTTCGCATCACGAAGAGCCTTCTCCACAGGCTCCAGAGT-GCTCCTAAACAGGTCTG 31551871 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033 ||| | ||||| || ||||| || || ||| | || || || || ||||| || Sbjct 31551872 CACACAACTCTTCAAACCGGGCTCTGGT--GATGGACGTGTAGAAGTCGATGCCTTCAAA 31551929 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||||||| ||| | | | || || || || || | | || || | || Sbjct 31551930 AAGTGAATCAATTTCCAAGTTGGCCTGGGTGCTGGATGACAGGGTCCTCTTGGCCCTCTC 31551989 Query 282094 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 282149 || || || | || | | | || |||| | |||| |||| || | || | Sbjct 31551990 GCAGGCGGTGCGCAGCCGCCTCACAGCCCGCTTGTTCTGACTGATG----TCCTTCTTGT 31552045 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209 ||| |||||||| ||||| ||| | | ||||| | || ||||| || || || | Sbjct 31552046 GTTTCCTCTTGAACTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAAAGTCCTCTCCAC 31552105 Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269 ||| | || | || | || || |||| | |||| ||||| || | | || | Sbjct 31552106 CCAGGTGGGTGTCCCCAGCTGTGGCCTTTACCTCAAAAATCCCATCATCTATGGTCAGGA 31552165 Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT--TGTC 282327 | |||||| || || ||||||| |||||| || || |||| | ||| || | Sbjct 31552166 CGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGAACATGTCTCTCTCCCTGAC 31552225 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || ||| | | ||| ||||| |||| |||||||| || ||||| || |||||||| | Sbjct 31552226 CTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGGTTCGTTGATAATTCTTAG 31552283 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||||| ||||| ||||| |||||||| || ||||| || | ||| || || || || Sbjct 31552284 CACATTGAGACCCGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGAGAGTCATTGAA 31552343 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGT 282507 ||| || || ||||| || || |||| || || | || | | |||| || || Sbjct 31552344 ATAAGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCCAAAAAAGCCTCAGCAGT 31552403 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT-T 282566 | ||||| ||| | | | ||| || ||||||| || || | | | |||| | | Sbjct 31552404 CTCCTTCATCTTAGTCAGCACCATAGAAGAAATTTCCTCAGG-GTAGAAAGCTTTTTTCT 31552462 Query 282567 CATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCC 282626 | || || || || | | || || | |||| || |||| ||| |||| Sbjct 31552463 CCCCTTTGTAGGACACCATTACCTTGGGCTTGCCTTCGTCATTGATTACTTGAAAAGGCC 31552522 Query 282627 AATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 282686 || |||||| |||||||| || | |||||||| | || || || | ||||| | Sbjct 31552523 AAAGTTTCATGTCTGATTGCACTACAGGATCATTAAATTTCCTGCCGATCAGACGTTTGG 31552582 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 ||||||| | ||| || ||||| | || | || | ||||||||||| ||||| | Sbjct 31552583 CATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCTGCATCCCCAATGA 31552642 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 | | || || || || || | || || ||||| ||||| || || || || || | Sbjct 31552643 GCCGCTCGGTGTCCGTGAAGGCCACGTAGCTGGGAGTGGTGCGGTTGCCCTGGTCGTTGG 31552702 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 | || || || || || || | || | || || || || | || || || | | Sbjct 31552703 CGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCACGAGTAGGTGGTACCCAGGT 31552762 Query 282867 CAATACCAATAGCAATT 282883 |||| ||||| || ||| Sbjct 31552763 CAATGCCAATGGCCATT 31552779 >seq7 Length=98542428 Score = 118 bits (130), Expect = 8e-21 Identities = 357/546 (65%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| |||||||| |||||||| || | | | ||| |||| ||| |||||||| Sbjct 30254038 GCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAG 30254097 Query 281837 AAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | ||||||| ||| | ||| || || || | || || || |||| ||||| Sbjct 30254098 AAGTCCTGTAGAAGTT-TCTGAATCTTGGGGATGCGGGTAGAACCACCCACTAGGACAAT 30254156 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | ||| || || ||||| || | |||| | |||| || || || || || Sbjct 30254157 ATCATGAATCTGGGACTTGTCCAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAG 30254216 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | |||| ||| | | | |||||| ||| || | |||| || | || Sbjct 30254217 GGTGCCACGGAACAGGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATA 30254276 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | || |||||||| | | ||||||| ||||| | | || || |||||| || Sbjct 30254277 GAAGTCGATTCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTAGAAGAGAG 30254336 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCTGATT 282131 | ||| |||||||||||||| || || | || | ||| | || ||| | || | | Sbjct 30254337 AGTACGCTTAGCACGTTCACAAGCAGTGCGCAGGCGTCGGACGGCCCTCTTGTTCTCACT 30254396 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | |||| || | |||||| ||| | | | | ||| | || | || Sbjct 30254397 GAT----GTCCTTCTTATGCTTGCGCTTGAATTCTGCGATAAA--ATGGTTGACCATTCG 30254450 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 || ||||| ||||| || || || | || | ||| | |||| | | || | || | Sbjct 30254451 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGAT 30254510 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||||||||||| || | | | |||||| || ||||| || | ||||| || || Sbjct 30254511 TCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAGTCAAAGATCAG 30254570 Query 282310 TACATT 282315 ||| || Sbjct 30254571 TACGTT 30254576 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||| || |||| ||||||||||||||| ||||| || ||||| | ||| Sbjct 30254682 TTTTTGTCTAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA 30254741 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || || || ||||| || Sbjct 30254742 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAGTAA 30254801 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 ||||| || || | ||| |||| Sbjct 30254802 GCAGGTACTGTGACAACAGCAT 30254823 Score = 89.7 bits (98), Expect = 4e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 || |||||| || ||||| || || | |||| |||| | || || ||||| || |||| Sbjct 30255614 CACCAAAAACCGTGTTGGTCGGGTTCATTGCAACTTGGTTCTTTGCGGCATCACCGATCA 30255673 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 |||| || || ||||| | ||||| || || || || || ||||||||||| | Sbjct 30255674 ATCGTTCCGTGTCAGTAAAAGCGACATAGCTCGGGGTGGTTCGGTTTCCTTGATCATTGG 30255733 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 | || ||||| ||||| |||| || | ||||| ||||| | || || || | || Sbjct 30255734 CTATTATTTCCACTTTTCCATGCTGGAAAACACCCACACACGAGTAGGTGGTGCCAAGAT 30255793 Query 282867 CAATACCAA 282875 |||| |||| Sbjct 30255794 CAATGCCAA 30255802 >seq11 Length=61308211 Score = 113 bits (124), Expect = 3e-19 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || ||| |||| |||||||| ||||||||||| || ||| | || |||||| | Sbjct 22180224 TGTACACTTATTCTGACTGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 22180283 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||||||||| | ||||| |||||||| |||||||||||| | | |||||| | Sbjct 22180284 GTGGTTGGAAGAGACAAATATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 22180343 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 22180344 GAAGCTTCTCATAAA 22180358 >seq27 Length=39960074 Score = 98.7 bits (108), Expect = 7e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| ||||| || ||||| ||||| ||||| ||||||||| | ||| || | || || Sbjct 13373217 TGTCGTAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGATATTCGCAAAGTCAT 13373158 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 ||||||||| ||||| ||| | || ||| ||||| || || ||||||||||| || || Sbjct 13373157 TCATTACGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAGATTGGTAGAGCTGGCCG 13373098 Query 131296 TGATGGA 131302 |||||| Sbjct 13373097 GGATGGA 13373091 >seq25 Length=39536964 Score = 86.0 bits (94), Expect = 5e-11 Identities = 208/309 (67%), Gaps = 22/309 (7%) Strand=Plus/Plus Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCTTCTTCAAA 281322 |||||| ||| ||| ||| |||| || ||| ||| ||| || || | || |||| Sbjct 29075320 TTTCTAGTTCGTTTCTAGTGTCAAT-GC-GCTCTTTGAGCTTCTTGTCCTCCTCGGCAAA 29075377 Query 281323 TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT--- 281379 | | ||| || ||| ||| || ||||||| |||||| | | |||||| Sbjct 29075378 CTTCTCAGCATCATTAACCATCCTTTCAATTT---CTTCAGG---TGTCAGGCGATTTTG 29075431 Query 281380 ---ATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCAC 281433 ||| ||||| || || || || |||||| ||| ||| || | || ||||| Sbjct 29075432 GTCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGCTGTCAC 29075488 Query 281434 ATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTG 281493 |||||| ||||| |||| | ||||| ||||||||||| || |||||||| | | Sbjct 29075489 TCGAAGAATGCCATTCACATCTATCTCAAAGGTGACTTCAATCTGTGGGACCCCACGGGG 29075548 Query 281494 AGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTT 281553 |||||| || || || || || ||| ||||||| | | ||| ||||| || || Sbjct 29075549 AGCAGGAGGAATTCCAGTCAGATCAAAAGTTCCCAAAAGGTGATTGTCTTTCGTCAAGGG 29075608 Query 281554 TCGTTCACC 281562 ||||||||| Sbjct 29075609 TCGTTCACC 29075617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740157264025962