Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 5e-11 >seq9 Length=83561422 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| ||| ||||| || ||||| || || |||| |||||| || ||| Sbjct 47795574 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATATTCTGG 47795515 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || ||||| | || | |||||||||||| | || |||||| || ||||| |||||| Sbjct 47795514 CTAAAGAAAAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTCATCAGCAGAGAT 47795455 Query 131984 GAAG 131987 |||| Sbjct 47795454 GAAG 47795451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186666259402157