Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq5617 134 1e-26 >seq5617 Length=80173 Score = 134 bits (148), Expect = 1e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| ||||||||| |||| ||||||||| Sbjct 30536 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 30477 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || ||||| || |||||||| |||||||| ||||| ||||| |||||| Sbjct 30476 CCCCAGGCTGAGAACCACGGCCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAG 30417 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || || | | ||||| ||||| Sbjct 30416 CTGAAGACCCTCCGAGTGAGGCTGCGGCGCTG 30385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447453222462640