Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1685 114 2e-20 >seq1685 Length=395008 Score = 114 bits (126), Expect = 2e-20 Identities = 118/152 (78%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| || ||||||| ||| || || || |||| Sbjct 385307 CCTGCTTCCAGCCGTAGAAGTGCATGCTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGT 385248 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||||| |||||||||||| || || ||| ||||| | || || ||||| |||| | Sbjct 385247 GGATGTTCAAAGACTGGCTTTGATCAAT-AAAAGCGCCTCTCTCGGCTGCCATCTTGAGA 385189 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||| ||||| ||||| |||||||| ||||| Sbjct 385188 ATGGTTTTCTGAGAAATTTCCCACACAGTCTT 385157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794627445554320