Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq8493 82.4 6e-11 >seq8493 Length=23336 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/214 (69%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 |||| || | ||||| || || ||| | ||||| | | ||| || | | || | Sbjct 8454 CCTCGTGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCAG 8513 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| ||||||||||| || || || ||||| ||||| || ||| | | | Sbjct 8514 CCCACTTCTGGAAAGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 8573 Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524 |||| | ||| ||||| ||||| || | ||| || |||||||| |||||||| Sbjct 8574 TCAGGTCCTC----CCCATCACGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCC 8629 Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||||| || | || || || | | |||||| Sbjct 8630 AGGGCCCAGCACCTCAGGGTGACCTCATGGTCAG 8663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397489809956232