Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 3e-13 >seq38 Length=2414427 Score = 91.5 bits (100), Expect = 3e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||| | || ||| || | || || |||| Sbjct 980164 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGATTCCTTTTGAT-TGTTGTAGTCAG 980106 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || | || |||| | || ||| || ||||||||||| | ||| || |||||||| | Sbjct 980105 ACAAAGCATGTCCATCTTTCATTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 980046 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| |||| || || || |||| ||| ||| | ||| | | ||| | Sbjct 980045 GAATTCCTTCCGTATCCTGGATCTTGGCCTTTATATTTTCTATTGTATCCTAGGGTTCAA 979986 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || ||||| ||||| || || || | ||||| | || |||||||| || Sbjct 979985 CCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 979934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983810253025950