Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq300 91.5 3e-13 >seq300 Length=1131972 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || ||||| || |||||||| || | ||| Sbjct 343363 TGGTGGTACTTTGTGTCTAAAGGAGTGGAGTATTTAGACACGGTGTTTTTTATCTTGAGG 343304 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || ||||| || || || || ||||||||||| | ||| |||||||| || Sbjct 343303 AAGAAAAACAATCAAGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 343244 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| | ||||| || || Sbjct 343243 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACA 343209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902811594693920