Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq373 109 4e-19
seq98 89.7 4e-13
seq778 82.4 6e-11
>seq373
Length=1017533
Score = 109 bits (120), Expect = 4e-19
Identities = 91/109 (83%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971
||||||||||| ||||| |||||| || ||||| ||||| || ||||| ||||| |||||
Sbjct 536132 CAAGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGGCTTCCAAATCGCCATGGAAAA 536074
Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| |||||||||||||| || || || || ||||| ||||||
Sbjct 536073 CATACATTCTGAAATGTACAGTCTCCTCATTGACACTTACATTAAAGAT 536025
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 44113 TGATTCTT--TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCA 44170
||| |||| | |||||||| |||| || ||||| | |||||||| || || |||||
Sbjct 534013 TGACTCTTAATAGGAGAACGGGTTGTAGCCTTTGCCGCAGTGGAAGGAATCTTTTTTTCT 533954
Query 44171 GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTT 44230
|| || ||||| ||||||| ||| | ||||||||||| ||||||| || | || |||
Sbjct 533953 GGCTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGACTGATGCCCGGCCTCACATTT 533894
Query 44231 TCAAATGAGTTAATAAGTCGTGATGA 44256
|| ||||| | || || | |||||
Sbjct 533893 TCCAATGAACTTATTAGCAGAGATGA 533868
>seq98
Length=1799927
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 791763 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 791704
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 791703 AACGAGTTTCAGAGTATCAGCG 791682
>seq778
Length=694618
Score = 82.4 bits (90), Expect = 6e-11
Identities = 115/162 (71%), Gaps = 6/162 (4%)
Strand=Plus/Minus
Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599
|| ||| ||||||||| || || | |||||| | || || ||||| ||||| |||||
Sbjct 76184 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 76125
Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653
||||| | ||||| ||||||||||| ||||| || | ||||| ||| |
Sbjct 76124 AGCATGGCTGGTAGCACAGGAGTTCATGACACTGTCGTCAACCAGTTACTGTCCAAAATT 76065
Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695
|| || || | || ||||| || || ||||| ||||| |||
Sbjct 76064 GATGGGGTAGAGCAGCTGAACAACATCTTAGTCATTGGTATG 76023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397198798397485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |