Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq556 86.0 9e-12 >seq556 Length=1594741 Score = 86.0 bits (94), Expect = 9e-12 Identities = 96/127 (76%), Gaps = 6/127 (5%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || || |||||||||||||| || |||||||| ||||| || |||||||| | ||| Sbjct 329613 AAGATCCAGGATAAAGAAGGTATTCCTCCTGATCAGCAAAGACTAATTTTTGCTAGCAAA 329554 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| |||| ||| | || || || || || || |||||||| || || |||| ||| Sbjct 329553 CAACTAGAAGATGGGCGTACTTT----GACTACAAAATTCAAAAGGAGTCCACTT--CAT 329500 Query 124743 TTGGTTT 124749 | |||| Sbjct 329499 CTTGTTT 329493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755401201110400