Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq556 86.0 9e-12
>seq556
Length=1594741
Score = 86.0 bits (94), Expect = 9e-12
Identities = 96/127 (76%), Gaps = 6/127 (5%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || || |||||||||||||| || |||||||| ||||| || |||||||| | |||
Sbjct 329613 AAGATCCAGGATAAAGAAGGTATTCCTCCTGATCAGCAAAGACTAATTTTTGCTAGCAAA 329554
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| |||| ||| | || || || || || || |||||||| || || |||| |||
Sbjct 329553 CAACTAGAAGATGGGCGTACTTT----GACTACAAAATTCAAAAGGAGTCCACTT--CAT 329500
Query 124743 TTGGTTT 124749
| ||||
Sbjct 329499 CTTGTTT 329493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755401201110400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |