Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq30 439 3e-118
seq602 426 2e-114
seq418 405 6e-108
seq635 246 4e-60
seq339 123 3e-23
seq92 116 5e-21
seq446 111 2e-19
seq62 104 3e-17
>seq30
Length=8517879
Score = 439 bits (486), Expect = 3e-118
Identities = 679/964 (70%), Gaps = 18/964 (2%)
Strand=Plus/Minus
Query 33214 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 33270
||||||| ||| || ||| |||| |||||| |||| || | |||| |||||
Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978
Query 33271 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326
|||| ||||| || ||||| | || || || || | | || | || || |||
Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919
Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386
||||| ||||||||||| || || ||||| || ||||| ||||| || || |||
Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859
Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446
|| | || |||| || || | ||| || || |||||||| || || |||||
Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799
Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 33506
| || ||||| || ||||| || ||||| | ||| || || || || |||||
Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739
Query 33507 ATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTC----GGTGGATGTAA 33562
|| || ||||| || ||| ||| | | ||| ||| ||| |||||
Sbjct 2591738 ATCCTGACAGCATTGACAATTATATTTCT--CTGACTCTCTGCTCCGAAGGTTTATGTAG 2591681
Query 33563 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAA 33622
| |||||| ||||| ||||| || ||||| || || || ||||| ||||| |||||||
Sbjct 2591680 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 2591621
Query 33623 TTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGC 33682
|| || ||||| || || |||||||| || || || || || ||||| |||||||| ||
Sbjct 2591620 CTCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGC 2591561
Query 33683 GAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA 33742
|| || || ||||||||||||||||| ||||| |||||||| | | | |||||||
Sbjct 2591560 AAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATG 2591501
Query 33743 ACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799
||| |||| ||||| |||||||| |||||||| |||||||||||
Sbjct 2591500 GGTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGG 2591441
Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859
||| || || || || || ||||| | | | || || ||||||||| ||||||||
Sbjct 2591440 CATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATC 2591381
Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919
||| | ||||| |||||||| || || |||||||| ||||| ||||| || || |||||
Sbjct 2591380 GATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAA 2591321
Query 33920 ACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33979
||| | || || |||||||| |||||| | ||| || || | || |||||| ||||
Sbjct 2591320 ACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCAC 2591261
Query 33980 TATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 34039
||| |||||||||||||| || || |||| ||||| |||||||||| | || || ||
Sbjct 2591260 TATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGG 2591201
Query 34040 TGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 34098
| | | | | ||| | | ||| || | || | ||||| || || |||||||||
Sbjct 2591200 TTTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 2591141
Query 34099 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 34158
|||| ||||| ||||| |||||||| | |||||| ||||| |||| ||| || || || |
Sbjct 2591140 ATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGA 2591081
Query 34159 CAAA 34162
||||
Sbjct 2591080 CAAA 2591077
>seq602
Length=1640730
Score = 426 bits (472), Expect = 2e-114
Identities = 658/935 (70%), Gaps = 12/935 (1%)
Strand=Plus/Plus
Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATT 33290
|||| |||||| |||| || | |||| ||| | |||| ||||| || |||||
Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGCCCG-TTGAACTTGACATCACGCCCATC 122164
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
| | || || || || | || || || |||||||| ||||||||||| || ||
Sbjct 122165 CTCTAATACTCGCCTACTCTCTTA---AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || ||||| ||||| || || ||| ||| | || |||| || ||
Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| || || |||||||| | || ||||| | |||||||| || |||||
Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341
Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530
|| | ||| | ||| | ||||| || || ||||| || || ||||| || ||
Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401
Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590
||| || | | || ||| ||||| | |||||| ||||| || || || |||
Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460
Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650
|| || || || ||||| ||||| ||||||| | | || ||||| || || || |||||
Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520
Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710
| || || || || ||||| |||||||| || || || | |||||||||||||||||
Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580
Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTT 33767
||||| |||||||| | | | |||||||| ||| |||| ||||| |
Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640
Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827
|||||||| |||||||| |||||||||||||| || || || || || ||||| |
Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700
Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887
| | || || || ||||| ||||||||||| | ||||| |||||||| || ||
Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760
Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947
|||||||| ||||| ||||| || || |||||||| | || || |||||||| ||||||
Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820
Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007
| ||| || | | || |||||||||||||||||||||||||| || ||||| ||
Sbjct 122821 TGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGCA 122880
Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067
| ||||| |||||||||| | || || ||| | || | ||| | | ||| ||
Sbjct 122881 AGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCC 122940
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
|| || | ||||| || || ||||||||||||| ||||| ||||| |||||||| | |
Sbjct 122941 TTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTGC 123000
Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||||| ||||| |||| ||| || || || |||||
Sbjct 123001 CAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035
>seq418
Length=2079112
Score = 405 bits (448), Expect = 6e-108
Identities = 669/960 (70%), Gaps = 18/960 (2%)
Strand=Plus/Plus
Query 33214 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 33270
||||||| ||| || ||| |||| |||||| |||| || | |||| |||||
Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060
Query 33271 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326
|||| ||||| | ||||| | || || || || || | || || || || |||
Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119
Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386
||||| ||||||||||| || || ||||| || ||||| ||||| || || |||
Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179
Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446
|| | || |||| || || | ||| || || || ||||| || || |||||
Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239
Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 33506
| || ||||| || ||||| || ||||| | ||| | || || || || |||||
Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299
Query 33507 ATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAA 33566
|| || ||||| || || ||| || | | || ||| ||||| | |
Sbjct 761300 ATCCTGACTGCATTGACAATTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGA 761359
Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626
||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| |
Sbjct 761360 TGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTA 761419
Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686
|| ||||| || || || ||||| | || || || |||||||| |||||||| || ||
Sbjct 761420 TTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAA 761479
Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA-TAAGTCTCTCTCCATAACC 33745
|| || ||| ||||||||||||| ||||| |||||| || | | ||||||||
Sbjct 761480 GAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATAGGT 761538
Query 33746 GGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33802
||| |||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct 761539 GGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCAT 761598
Query 33803 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33862
|| || || || || ||||| | | | || || |||||||| ||||||||
Sbjct 761599 TGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATCGAT 761653
Query 33863 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33922
| ||||| |||||||| || || |||||||| ||||| ||||| || || ||||||||
Sbjct 761654 GAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACA 761713
Query 33923 TCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33982
|| || || |||||||| |||||| | ||| || || | || ||||||||||||||
Sbjct 761714 GCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTAT 761773
Query 33983 TCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 34042
||||||||||| || || || |||| ||||| |||||||||| | || || ||| |
Sbjct 761774 GCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTT 761833
Query 34043 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102
|| | ||| | | ||| || || || | ||||| || || ||||||||| |||
Sbjct 761834 CAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGA 761893
Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||||| || || |||||||| | ||| || ||||| |||| ||| || || || |||||
Sbjct 761894 AGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953
>seq635
Length=1382696
Score = 246 bits (272), Expect = 4e-60
Identities = 342/474 (72%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
|||||||| |||||| | ||| ||| | || | || |||||||||||| || || | |
Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| | |||| ||||| || |||||||| || || ||| || | || || | ||
Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|||||||||| || || |||||||| ||||| || || || || || |||| || |
Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
| || || || | |||||||| | ||| ||||| | | |||| | ||| |||||||
Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383
Query 62286 TTTG-TAT--TCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
| || ||| |||| ||||||||| | | ||||| || || ||||| ||||||
Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||||| | | | || || | ||| || | ||| || || || | || ||||||||
Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
|| || ||||| |||||||| ||||| |||||||| ||||| | ||||||||||||||
Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62515
|| ||| ||||||||||| ||||| ||||| || || | | |||||| || ||
Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616
>seq339
Length=2552696
Score = 123 bits (136), Expect = 3e-23
Identities = 104/128 (81%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| || || ||||| |||||||| ||||| |||||||| ||||| |
Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579
Query 62508 CTATTTCT 62515
|| || ||
Sbjct 2056578 CTGTTCCT 2056571
Score = 95.1 bits (104), Expect = 2e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || |||||||| || || || || |||| ||| || || || || || || |
Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
||||||||||||||||||| | ||||| || || || || || || ||||| ||||
Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | ||||||||| || || || || ||||| || || || || || || | || |
Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 2048055 GTTTATTTGA 2048046
Score = 91.5 bits (100), Expect = 2e-13
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| ||||||||||||||||||||| || |||||||| || | || || || || | |
Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564
Query 63323 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63381
|| || || ||||||||||| || |||||| || |||||| | | || || ||||||
Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505
Query 63382 ACGGTTCCA 63390
| |||||||
Sbjct 2043504 ATGGTTCCA 2043496
>seq92
Length=5367877
Score = 116 bits (128), Expect = 5e-21
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | || || ||||| |||||||| ||||| ||||| | |||||
Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
||||||||||| | |||||| ||||| |||||||| ||||||||||| ||||| |||||
Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796
Score = 89.7 bits (98), Expect = 6e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025
||||||||||| || ||||||||||||||||||||||| ||||| | || ||||||
Sbjct 3842359 AAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAAAA 3842300
Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCA 34054
||||| || || ||||| || || |||||
Sbjct 3842299 TATTTCTCATCCGGTGTAAGCTTGTTCCA 3842271
>seq446
Length=2046506
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||||| || || ||||| || || || ||||| || || || || |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| |||||||| || || || || ||||||||||||||||| ||||| |||||||
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 33724 C 33724
|
Sbjct 492490 C 492490
Score = 102 bits (112), Expect = 1e-16
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901
|||||||| ||||||||||| | ||||| |||||||| || || |||||||| |||||
Sbjct 489518 ATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGC 489459
Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947
||||| || || |||||||| | || || |||||||| ||||||
Sbjct 489458 AATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCT 489413
>seq62
Length=6363713
Score = 104 bits (114), Expect = 3e-17
Identities = 65/70 (93%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 1555275 TGCTCCTCCATCGAGGACGACTTCAACTATGGCAGCAACGTGGCGTCTGCCAGCGTGCAC 1555334
Query 188232 ATACGAATGG 188241
|| |||||||
Sbjct 1555335 ATCCGAATGG 1555344
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437
||||| | ||||| |||||||||||||||||| |||||||||| ||||| || || |||
Sbjct 1578699 GGATCCCTGGGCTTTATTTTCGCATTGACTTTAAACAGACATAAGCATCCTCTTAACCTG 1578758
Query 188438 TACCTACTTTGTGGATTT 188455
||||| |||| |||||||
Sbjct 1578759 TACCTGCTTTTTGGATTT 1578776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629771914605840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |