Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq30 439 3e-118 seq602 426 2e-114 seq418 405 6e-108 seq635 246 4e-60 seq339 123 3e-23 seq92 116 5e-21 seq446 111 2e-19 seq62 104 3e-17 >seq30 Length=8517879 Score = 439 bits (486), Expect = 3e-118 Identities = 679/964 (70%), Gaps = 18/964 (2%) Strand=Plus/Minus Query 33214 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 33270 ||||||| ||| || ||| |||| |||||| |||| || | |||| ||||| Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978 Query 33271 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326 |||| ||||| || ||||| | || || || || | | || | || || ||| Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919 Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386 ||||| ||||||||||| || || ||||| || ||||| ||||| || || ||| Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859 Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446 || | || |||| || || | ||| || || |||||||| || || ||||| Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799 Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 33506 | || ||||| || ||||| || ||||| | ||| || || || || ||||| Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739 Query 33507 ATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTC----GGTGGATGTAA 33562 || || ||||| || ||| ||| | | ||| ||| ||| ||||| Sbjct 2591738 ATCCTGACAGCATTGACAATTATATTTCT--CTGACTCTCTGCTCCGAAGGTTTATGTAG 2591681 Query 33563 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAA 33622 | |||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| Sbjct 2591680 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 2591621 Query 33623 TTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGC 33682 || || ||||| || || |||||||| || || || || || ||||| |||||||| || Sbjct 2591620 CTCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGC 2591561 Query 33683 GAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA 33742 || || || ||||||||||||||||| ||||| |||||||| | | | ||||||| Sbjct 2591560 AAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATG 2591501 Query 33743 ACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 ||| |||| ||||| |||||||| |||||||| ||||||||||| Sbjct 2591500 GGTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGG 2591441 Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859 ||| || || || || || ||||| | | | || || ||||||||| |||||||| Sbjct 2591440 CATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATC 2591381 Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919 ||| | ||||| |||||||| || || |||||||| ||||| ||||| || || ||||| Sbjct 2591380 GATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAA 2591321 Query 33920 ACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33979 ||| | || || |||||||| |||||| | ||| || || | || |||||| |||| Sbjct 2591320 ACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCAC 2591261 Query 33980 TATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 34039 ||| |||||||||||||| || || |||| ||||| |||||||||| | || || || Sbjct 2591260 TATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGG 2591201 Query 34040 TGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 34098 | | | | | ||| | | ||| || | || | ||||| || || ||||||||| Sbjct 2591200 TTTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 2591141 Query 34099 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 34158 |||| ||||| ||||| |||||||| | |||||| ||||| |||| ||| || || || | Sbjct 2591140 ATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGA 2591081 Query 34159 CAAA 34162 |||| Sbjct 2591080 CAAA 2591077 >seq602 Length=1640730 Score = 426 bits (472), Expect = 2e-114 Identities = 658/935 (70%), Gaps = 12/935 (1%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATT 33290 |||| |||||| |||| || | |||| ||| | |||| ||||| || ||||| Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGCCCG-TTGAACTTGACATCACGCCCATC 122164 Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 | | || || || || | || || || |||||||| ||||||||||| || || Sbjct 122165 CTCTAATACTCGCCTACTCTCTTA---AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || ||||| ||||| || || ||| ||| | || |||| || || Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||| || || |||||||| | || ||||| | |||||||| || ||||| Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 || | ||| | ||| | ||||| || || ||||| || || ||||| || || Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 ||| || | | || ||| ||||| | |||||| ||||| || || || ||| Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || || || || ||||| ||||| ||||||| | | || ||||| || || || ||||| Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 | || || || || ||||| |||||||| || || || | ||||||||||||||||| Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTT 33767 ||||| |||||||| | | | |||||||| ||| |||| ||||| | Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 |||||||| |||||||| |||||||||||||| || || || || || ||||| | Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | | || || || ||||| ||||||||||| | ||||| |||||||| || || Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| ||||| ||||| || || |||||||| | || || |||||||| |||||| Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | ||| || | | || |||||||||||||||||||||||||| || ||||| || Sbjct 122821 TGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGCA 122880 Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067 | ||||| |||||||||| | || || ||| | || | ||| | | ||| || Sbjct 122881 AGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCC 122940 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || || | ||||| || || ||||||||||||| ||||| ||||| |||||||| | | Sbjct 122941 TTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTGC 123000 Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||||| ||||| |||| ||| || || || ||||| Sbjct 123001 CAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035 >seq418 Length=2079112 Score = 405 bits (448), Expect = 6e-108 Identities = 669/960 (70%), Gaps = 18/960 (2%) Strand=Plus/Plus Query 33214 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 33270 ||||||| ||| || ||| |||| |||||| |||| || | |||| ||||| Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060 Query 33271 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326 |||| ||||| | ||||| | || || || || || | || || || || ||| Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119 Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386 ||||| ||||||||||| || || ||||| || ||||| ||||| || || ||| Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179 Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446 || | || |||| || || | ||| || || || ||||| || || ||||| Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239 Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 33506 | || ||||| || ||||| || ||||| | ||| | || || || || ||||| Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299 Query 33507 ATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAA 33566 || || ||||| || || ||| || | | || ||| ||||| | | Sbjct 761300 ATCCTGACTGCATTGACAATTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGA 761359 Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 ||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| | Sbjct 761360 TGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTA 761419 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 || ||||| || || || ||||| | || || || |||||||| |||||||| || || Sbjct 761420 TTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAA 761479 Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA-TAAGTCTCTCTCCATAACC 33745 || || ||| ||||||||||||| ||||| |||||| || | | |||||||| Sbjct 761480 GAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATAGGT 761538 Query 33746 GGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33802 ||| |||| ||||| |||||||| |||||||| |||||||||||||| Sbjct 761539 GGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCAT 761598 Query 33803 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33862 || || || || || ||||| | | | || || |||||||| |||||||| Sbjct 761599 TGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATCGAT 761653 Query 33863 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33922 | ||||| |||||||| || || |||||||| ||||| ||||| || || |||||||| Sbjct 761654 GAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACA 761713 Query 33923 TCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33982 || || || |||||||| |||||| | ||| || || | || |||||||||||||| Sbjct 761714 GCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTAT 761773 Query 33983 TCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 34042 ||||||||||| || || || |||| ||||| |||||||||| | || || ||| | Sbjct 761774 GCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTT 761833 Query 34043 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102 || | ||| | | ||| || || || | ||||| || || ||||||||| ||| Sbjct 761834 CAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGA 761893 Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||||| || || |||||||| | ||| || ||||| |||| ||| || || || ||||| Sbjct 761894 AGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953 >seq635 Length=1382696 Score = 246 bits (272), Expect = 4e-60 Identities = 342/474 (72%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 |||||||| |||||| | ||| ||| | || | || |||||||||||| || || | | Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| ||||| || |||||||| || || ||| || | || || | || Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 |||||||||| || || |||||||| ||||| || || || || || |||| || | Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 | || || || | |||||||| | ||| ||||| | | |||| | ||| ||||||| Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383 Query 62286 TTTG-TAT--TCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 | || ||| |||| ||||||||| | | ||||| || || ||||| |||||| Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401 ||||| | | | || || | ||| || | ||| || || || | || |||||||| Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502 Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461 || || ||||| |||||||| ||||| |||||||| ||||| | |||||||||||||| Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562 Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62515 || ||| ||||||||||| ||||| ||||| || || | | |||||| || || Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616 >seq339 Length=2552696 Score = 123 bits (136), Expect = 3e-23 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| || || ||||| |||||||| ||||| |||||||| ||||| | Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 |||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579 Query 62508 CTATTTCT 62515 || || || Sbjct 2056578 CTGTTCCT 2056571 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || || || || |||| ||| || || || || || || | Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||||||||||||||| | ||||| || || || || || || ||||| |||| Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | ||||||||| || || || || ||||| || || || || || || | || | Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 2048055 GTTTATTTGA 2048046 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || ||||||||||||||||||||| || |||||||| || | || || || || | | Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564 Query 63323 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63381 || || || ||||||||||| || |||||| || |||||| | | || || |||||| Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505 Query 63382 ACGGTTCCA 63390 | ||||||| Sbjct 2043504 ATGGTTCCA 2043496 >seq92 Length=5367877 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | || || ||||| |||||||| ||||| ||||| | ||||| Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||||||||| | |||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796 Score = 89.7 bits (98), Expect = 6e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| || ||||||||||||||||||||||| ||||| | || |||||| Sbjct 3842359 AAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAAAA 3842300 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCA 34054 ||||| || || ||||| || || ||||| Sbjct 3842299 TATTTCTCATCCGGTGTAAGCTTGTTCCA 3842271 >seq446 Length=2046506 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||||| || || ||||| || || || ||||| || || || || | Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| |||||||| || || || || ||||||||||||||||| ||||| ||||||| Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491 Query 33724 C 33724 | Sbjct 492490 C 492490 Score = 102 bits (112), Expect = 1e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||||||||| | ||||| |||||||| || || |||||||| ||||| Sbjct 489518 ATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGC 489459 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 ||||| || || |||||||| | || || |||||||| |||||| Sbjct 489458 AATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCT 489413 >seq62 Length=6363713 Score = 104 bits (114), Expect = 3e-17 Identities = 65/70 (93%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 1555275 TGCTCCTCCATCGAGGACGACTTCAACTATGGCAGCAACGTGGCGTCTGCCAGCGTGCAC 1555334 Query 188232 ATACGAATGG 188241 || ||||||| Sbjct 1555335 ATCCGAATGG 1555344 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437 ||||| | ||||| |||||||||||||||||| |||||||||| ||||| || || ||| Sbjct 1578699 GGATCCCTGGGCTTTATTTTCGCATTGACTTTAAACAGACATAAGCATCCTCTTAACCTG 1578758 Query 188438 TACCTACTTTGTGGATTT 188455 ||||| |||| ||||||| Sbjct 1578759 TACCTGCTTTTTGGATTT 1578776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629771914605840