Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq30 398 1e-105
seq602 389 5e-103
seq418 374 1e-98
seq635 264 1e-65
seq62 176 6e-39
seq339 132 6e-26
seq446 114 2e-20
seq92 111 2e-19
>seq30
Length=8517879
Score = 398 bits (440), Expect = 1e-105
Identities = 671/964 (70%), Gaps = 18/964 (2%)
Strand=Plus/Minus
Query 35790 AAATATCGGCAT---TTATGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTT 35846
||||||| ||| || ||| |||| || ||| |||| | | |||| |||||
Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978
Query 35847 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 35902
|||| ||||| || ||||| | || || || || | | || | || || |||
Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919
Query 35903 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtt 35962
||||| ||||| ||||| || || ||||| || || |||||||| || | |||
Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859
Query 35963 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 36022
|| | || |||| || || | ||| || || || ||||| || || |||||
Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799
Query 36023 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 36082
| || ||||| || || || || ||||| | ||| || || || || |||||
Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739
Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTC----GGTGGATACAA 36138
|| ||| || | || | | || || | ||| ||| ||| ||| || |
Sbjct 2591738 ATCCTGACAGCAT-TGACA-ATTATATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAG 2591681
Query 36139 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 36198
| |||||| ||||| ||||| || ||||| || || || ||||| ||||| |||||||
Sbjct 2591680 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 2591621
Query 36199 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 36258
|| || ||||| || || |||||||| || || || || || ||||| |||||||| ||
Sbjct 2591620 CTCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGC 2591561
Query 36259 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 36318
||| || ||||||||||| |||||||| ||||| |||||||| | | | |||||||
Sbjct 2591560 AAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATG 2591501
Query 36319 ACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375
||| |||| ||||| |||||||| |||||||| |||||||||||
Sbjct 2591500 GGTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGG 2591441
Query 36376 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 36435
||||||||| ||||| || ||||| | | | || || ||||||||| || |||||
Sbjct 2591440 CATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATC 2591381
Query 36436 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 36495
|| | ||||| |||||||| || || |||||||| ||||| || || || || |||||
Sbjct 2591380 GATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAA 2591321
Query 36496 ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 36555
||| | || || |||||||| |||||| | ||| || || | || |||||| ||||
Sbjct 2591320 ACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCAC 2591261
Query 36556 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGG 36615
||| || ||||||||||| || || |||| ||||| |||||||||| | || | ||
Sbjct 2591260 TATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGG 2591201
Query 36616 TGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674
| | | | | ||| | | ||| || | || | ||||| || || |||||||||
Sbjct 2591200 TTTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 2591141
Query 36675 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 36734
|||| ||||| ||||| |||||||| | |||||| ||||| |||| || ||||| || |
Sbjct 2591140 ATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGA 2591081
Query 36735 CAAA 36738
||||
Sbjct 2591080 CAAA 2591077
>seq602
Length=1640730
Score = 389 bits (430), Expect = 5e-103
Identities = 596/848 (70%), Gaps = 4/848 (0%)
Strand=Plus/Plus
Query 35894 AAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACA 35953
|| || |||||||| ||||| ||||| || || ||||| || || |||||||| ||
Sbjct 122189 AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACT 122248
Query 35954 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 36013
| ||| ||| | || |||| || || | ||| || || || ||||| | ||
Sbjct 122249 CTGAAAACTTTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACGAATTCAGTGTAC 122308
Query 36014 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 36073
||||| | |||||||| || || || || | ||| | ||| | ||||| ||
Sbjct 122309 TGCTTCATTAAAGTGCAATTCATCCCGATGAGATTTATTGGCAAGGCCTCTGTAAGGAAC 122368
Query 36074 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGA 36133
|| ||||| || ||| || | || || | | ||| | | || ||| |
Sbjct 122369 TCCTGTTCTATCCTGACAGCATTGACGATTATTTCTCTGACTCTCTGCTCCGAAGGTTTA 122428
Query 36134 TACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTA 36193
| | | |||||| ||||| || || || ||||| || || || ||||| ||||| |||
Sbjct 122429 TGTAGCAGATGTTTGAACATTAA-CACGCAAAATCACAATGGAGTCCCTCATCTCTGCTA 122487
Query 36194 ATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 36253
|||| | | || ||||| || || || ||||| | || || || || ||||| ||||||
Sbjct 122488 ATTAGTGCATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTGAGCCAGAATATG 122547
Query 36254 GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCT 36313
|| ||||| || | ||||||||| |||||||| ||||| |||||||| | | | |||
Sbjct 122548 GATGCAAAAGAACTAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACTACACATTCT 122607
Query 36314 CCATAACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 36370
||||| ||| |||| ||||| | |||||||| |||||||| ||||||
Sbjct 122608 CCATAGGTGGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACA 122667
Query 36371 CAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT 36430
|||||||||||||| ||||| || ||||| | | | || || || ||||| ||
Sbjct 122668 CAAGGCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATGTTTAATGTAA 122727
Query 36431 GTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCG 36490
||||| || | ||||| |||||||| || || |||||||| ||||| || || || ||
Sbjct 122728 GTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCA 122787
Query 36491 TAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCA 36550
|||||||| | || || |||||||| |||||| | ||| || | | || ||||||
Sbjct 122788 TAGAAACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTTCACCAAGTTTTCA 122847
Query 36551 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 36610
||||||||||| |||||||| || ||||| || | ||||| |||||||||| | ||
Sbjct 122848 TTCACTATTCCATCACTGGCCGCGAAAAAAGCAAGCACATGGGATATAAAATATCTCTCC 122907
Query 36611 TTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 36670
| ||| | || | ||| | | ||| || || || | ||||| || || |||||
Sbjct 122908 TCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTC 122967
Query 36671 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAA 36730
|||||||| ||||| ||||| |||||||| | |||||| ||||| |||| || |||||
Sbjct 122968 CAAAATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTTGATGGGAAAG 123027
Query 36731 ATAACAAA 36738
|| |||||
Sbjct 123028 ATGACAAA 123035
>seq418
Length=2079112
Score = 374 bits (414), Expect = 1e-98
Identities = 666/964 (69%), Gaps = 26/964 (3%)
Strand=Plus/Plus
Query 35790 AAATATCGGCAT---TTATGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTT 35846
||||||| ||| || ||| |||| || ||| |||| | | |||| |||||
Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060
Query 35847 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 35902
|||| ||||| | ||||| | || || || || || | || || || || |||
Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119
Query 35903 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtt 35962
||||| ||||| ||||| || || ||||| || || |||||||| || | |||
Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179
Query 35963 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 36022
|| | || |||| || || | ||| || || |||||||| || || |||||
Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239
Query 36023 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 36082
| || ||||| || || || || ||||| | ||| | || || || || |||||
Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299
Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTC----GGTGGATACAA 36138
|| ||| || | | | ||| || | ||| ||| ||| ||| || |
Sbjct 761300 ATCCTGACTGCAT---TGACAATT-ATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTAC 761355
Query 36139 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 36198
| |||||| ||||| ||||| || ||||| || || || ||||| ||||| |||||||
Sbjct 761356 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 761415
Query 36199 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 36258
| || ||||| || || || ||||| | || || || |||||||| |||||||| ||
Sbjct 761416 CTTATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGC 761475
Query 36259 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA-TAAGTCTCTCTCCAT 36317
||| || |||||| |||| |||||||| ||||| |||||| || | | |||||||
Sbjct 761476 AAAAGAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCAT 761534
Query 36318 AACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 36374
| ||| |||| ||||| |||||||| |||||||| ||||||||||
Sbjct 761535 AGGTGGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAG 761594
Query 36375 GCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTAT 36434
|||||||||| ||||| || ||||| | | | || || |||||||| ||||
Sbjct 761595 GCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTAT 761649
Query 36435 CAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGA 36494
| || | ||||| |||||||| || || |||||||| ||||| || || || || ||||
Sbjct 761650 CGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGA 761709
Query 36495 AACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCA 36554
|||| || || || |||||||| |||||| | ||| || || | || ||||||||||
Sbjct 761710 AACAGCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCA 761769
Query 36555 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTG 36614
|||| || |||||||| || || || |||| ||||| |||||||||| | || | |
Sbjct 761770 CTATGCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAG 761829
Query 36615 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674
|| | || | ||| | | ||| || || || | ||||| || || |||||||||
Sbjct 761830 GTTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 761889
Query 36675 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 36734
||| ||||| || || |||||||| | ||| || ||||| |||| || ||||| || |
Sbjct 761890 GTGAAGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGA 761949
Query 36735 CAAA 36738
||||
Sbjct 761950 CAAA 761953
>seq635
Length=1382696
Score = 264 bits (292), Expect = 1e-65
Identities = 346/474 (73%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|||||||| |||||| | ||| ||| | || | || |||||||||||| || || | |
Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | |||| ||||| || |||||||| || || ||| || | || || | ||
Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|||||||||| || || |||||||| ||||| || || || || || |||| || |
Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
| || || || | |||||||| | ||| ||||| | | |||| | ||| |||||||
Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383
Query 65079 TTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135
| || ||| |||| ||||||||| | || ||||| || || ||||| ||||||
Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443
Query 65136 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGATTAACTACTTGAAATTCTCC 65194
||||| | | | || || | ||| || | ||| ||||| || | |||||||||||
Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502
Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254
|| || ||||| |||||||| ||||| |||||||| ||||| | |||||||||||||||
Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562
Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308
|| ||| ||||||||||| ||||| ||||| || || | | |||||| || ||
Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616
>seq62
Length=6363713
Score = 176 bits (194), Expect = 6e-39
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290
|| |||||| | | ||||||| | ||||| |||| ||| ||||||||||||||||||
Sbjct 1589373 TTTTTATTAACTGCCTCCAAAAAGCGCAACAGGTGCAGGAATAGATTGATGATATCCAAG 1589314
Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350
|||| ||||| | ||||| ||||| |||||||| || || |||| || ||||||||
Sbjct 1589313 TAGAGGTTGATGGCAGCTAAGACATACTCTTCAGGTGACAGTCTATGCATCAGTGAGTGT 1589254
Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410
||||||||||| |||||||||||||| | |||||| ||| ||||| || ||||| |||
Sbjct 1589253 GTGTCATAGATGATGAATCCGCAGAAAAGAAGGGCTCCACCAGCAGCCATGACCAATTCC 1589194
Query 9411 ACTGTTTCACTTTGCACAAATA 9432
| ||| ||||| | | |||||
Sbjct 1589193 ATTGTCTCACTATAAAAAAATA 1589172
Score = 107 bits (118), Expect = 3e-18
Identities = 87/104 (84%), Gaps = 5/104 (5%)
Strand=Plus/Minus
Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906
||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1555344 CCATTCGGATGTGCACGCTGGCAGACGCCACGTTGCTGCCATAGTTGAAGTCGTCCTCGA 1555285
Query 9907 TGGAGGAGCACGCGTA----GAGGCTCGGCATGGCCATGGCGGC 9946
|||||||||| | ||| ||||| || ||||||| ||||
Sbjct 1555284 TGGAGGAGCAAGGGTAACGGGAGGC-AGGATCGGCCATGCCGGC 1555242
Score = 84.2 bits (92), Expect = 3e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691
||||||| |||||||||| | || || ||||| |||||||||| |||||||||||||||
Sbjct 1578776 AAATCCAAAAAGCAGGTACAGGTTAAGAGGATGCTTATGTCTGTTTAAAGTCAATGCGAA 1578717
Query 9692 AATCAAGCC 9700
||| |||||
Sbjct 1578716 AATAAAGCC 1578708
>seq339
Length=2552696
Score = 132 bits (146), Expect = 6e-26
Identities = 106/128 (83%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| || || ||||| |||||||| ||||| |||||||| ||||| | |
Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579
Query 65301 CTATTTCT 65308
|| || ||
Sbjct 2056578 CTGTTCCT 2056571
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| || | ||| |||||||||||||| | || || || || || || || || | |
Sbjct 2031457 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCAGGA 2031398
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
||||||| || || || | ||||| ||||| ||| |||| || |||| || ||||
Sbjct 2031397 TGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTATCCA 2031338
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964
||| || || || || ||| |||||| || |||||||| |||||
Sbjct 2031337 GTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCAT 2031292
Score = 91.5 bits (100), Expect = 2e-13
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| ||||||||||||||||||||| || |||||||| || | || | || |||| |
Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564
Query 66116 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCATAATGCC 66174
|| || || ||||||||||| || |||||| || |||||| | | || || ||||||
Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505
Query 66175 ACGGTTCCA 66183
| |||||||
Sbjct 2043504 ATGGTTCCA 2043496
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || ||||| || || || || |||||||| || || || || || || |
Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||||||||| ||||| | ||||| || || || || | || ||||| ||||
Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | ||||||||| || ||||| || ||||| || || || || || || | || |
Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 2048055 GTTTATTTGA 2048046
>seq446
Length=2046506
Score = 114 bits (126), Expect = 2e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||||| || || ||||| || || || ||||| || || || || |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| |||||||| ||||| || ||||||||||| |||||||| ||||| |||||||
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 36300 C 36300
|
Sbjct 492490 C 492490
>seq92
Length=5367877
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | || |||||||| |||||||| ||||| ||||| | |||||
Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||||||||| | || || ||||| |||||||||||||||||||| || || |||||
Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658125057790520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |