Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq30 398 1e-105 seq602 389 5e-103 seq418 374 1e-98 seq635 264 1e-65 seq62 176 6e-39 seq339 132 6e-26 seq446 114 2e-20 seq92 111 2e-19 >seq30 Length=8517879 Score = 398 bits (440), Expect = 1e-105 Identities = 671/964 (70%), Gaps = 18/964 (2%) Strand=Plus/Minus Query 35790 AAATATCGGCAT---TTATGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTT 35846 ||||||| ||| || ||| |||| || ||| |||| | | |||| ||||| Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978 Query 35847 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 35902 |||| ||||| || ||||| | || || || || | | || | || || ||| Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919 Query 35903 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtt 35962 ||||| ||||| ||||| || || ||||| || || |||||||| || | ||| Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859 Query 35963 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 36022 || | || |||| || || | ||| || || || ||||| || || ||||| Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799 Query 36023 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 36082 | || ||||| || || || || ||||| | ||| || || || || ||||| Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739 Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTC----GGTGGATACAA 36138 || ||| || | || | | || || | ||| ||| ||| ||| || | Sbjct 2591738 ATCCTGACAGCAT-TGACA-ATTATATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAG 2591681 Query 36139 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 36198 | |||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| Sbjct 2591680 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 2591621 Query 36199 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 36258 || || ||||| || || |||||||| || || || || || ||||| |||||||| || Sbjct 2591620 CTCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGC 2591561 Query 36259 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 36318 ||| || ||||||||||| |||||||| ||||| |||||||| | | | ||||||| Sbjct 2591560 AAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATG 2591501 Query 36319 ACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 ||| |||| ||||| |||||||| |||||||| ||||||||||| Sbjct 2591500 GGTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGG 2591441 Query 36376 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 36435 ||||||||| ||||| || ||||| | | | || || ||||||||| || ||||| Sbjct 2591440 CATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATC 2591381 Query 36436 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 36495 || | ||||| |||||||| || || |||||||| ||||| || || || || ||||| Sbjct 2591380 GATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAA 2591321 Query 36496 ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 36555 ||| | || || |||||||| |||||| | ||| || || | || |||||| |||| Sbjct 2591320 ACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCAC 2591261 Query 36556 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGG 36615 ||| || ||||||||||| || || |||| ||||| |||||||||| | || | || Sbjct 2591260 TATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGG 2591201 Query 36616 TGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674 | | | | | ||| | | ||| || | || | ||||| || || ||||||||| Sbjct 2591200 TTTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 2591141 Query 36675 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 36734 |||| ||||| ||||| |||||||| | |||||| ||||| |||| || ||||| || | Sbjct 2591140 ATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGA 2591081 Query 36735 CAAA 36738 |||| Sbjct 2591080 CAAA 2591077 >seq602 Length=1640730 Score = 389 bits (430), Expect = 5e-103 Identities = 596/848 (70%), Gaps = 4/848 (0%) Strand=Plus/Plus Query 35894 AAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACA 35953 || || |||||||| ||||| ||||| || || ||||| || || |||||||| || Sbjct 122189 AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACT 122248 Query 35954 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 36013 | ||| ||| | || |||| || || | ||| || || || ||||| | || Sbjct 122249 CTGAAAACTTTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACGAATTCAGTGTAC 122308 Query 36014 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 36073 ||||| | |||||||| || || || || | ||| | ||| | ||||| || Sbjct 122309 TGCTTCATTAAAGTGCAATTCATCCCGATGAGATTTATTGGCAAGGCCTCTGTAAGGAAC 122368 Query 36074 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGA 36133 || ||||| || ||| || | || || | | ||| | | || ||| | Sbjct 122369 TCCTGTTCTATCCTGACAGCATTGACGATTATTTCTCTGACTCTCTGCTCCGAAGGTTTA 122428 Query 36134 TACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTA 36193 | | | |||||| ||||| || || || ||||| || || || ||||| ||||| ||| Sbjct 122429 TGTAGCAGATGTTTGAACATTAA-CACGCAAAATCACAATGGAGTCCCTCATCTCTGCTA 122487 Query 36194 ATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 36253 |||| | | || ||||| || || || ||||| | || || || || ||||| |||||| Sbjct 122488 ATTAGTGCATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTGAGCCAGAATATG 122547 Query 36254 GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCT 36313 || ||||| || | ||||||||| |||||||| ||||| |||||||| | | | ||| Sbjct 122548 GATGCAAAAGAACTAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACTACACATTCT 122607 Query 36314 CCATAACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 36370 ||||| ||| |||| ||||| | |||||||| |||||||| |||||| Sbjct 122608 CCATAGGTGGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACA 122667 Query 36371 CAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT 36430 |||||||||||||| ||||| || ||||| | | | || || || ||||| || Sbjct 122668 CAAGGCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATGTTTAATGTAA 122727 Query 36431 GTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCG 36490 ||||| || | ||||| |||||||| || || |||||||| ||||| || || || || Sbjct 122728 GTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCA 122787 Query 36491 TAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCA 36550 |||||||| | || || |||||||| |||||| | ||| || | | || |||||| Sbjct 122788 TAGAAACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTTCACCAAGTTTTCA 122847 Query 36551 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 36610 ||||||||||| |||||||| || ||||| || | ||||| |||||||||| | || Sbjct 122848 TTCACTATTCCATCACTGGCCGCGAAAAAAGCAAGCACATGGGATATAAAATATCTCTCC 122907 Query 36611 TTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 36670 | ||| | || | ||| | | ||| || || || | ||||| || || ||||| Sbjct 122908 TCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTC 122967 Query 36671 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAA 36730 |||||||| ||||| ||||| |||||||| | |||||| ||||| |||| || ||||| Sbjct 122968 CAAAATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTTGATGGGAAAG 123027 Query 36731 ATAACAAA 36738 || ||||| Sbjct 123028 ATGACAAA 123035 >seq418 Length=2079112 Score = 374 bits (414), Expect = 1e-98 Identities = 666/964 (69%), Gaps = 26/964 (3%) Strand=Plus/Plus Query 35790 AAATATCGGCAT---TTATGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTT 35846 ||||||| ||| || ||| |||| || ||| |||| | | |||| ||||| Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060 Query 35847 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 35902 |||| ||||| | ||||| | || || || || || | || || || || ||| Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119 Query 35903 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtt 35962 ||||| ||||| ||||| || || ||||| || || |||||||| || | ||| Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179 Query 35963 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 36022 || | || |||| || || | ||| || || |||||||| || || ||||| Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239 Query 36023 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 36082 | || ||||| || || || || ||||| | ||| | || || || || ||||| Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299 Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTC----GGTGGATACAA 36138 || ||| || | | | ||| || | ||| ||| ||| ||| || | Sbjct 761300 ATCCTGACTGCAT---TGACAATT-ATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTAC 761355 Query 36139 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 36198 | |||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| Sbjct 761356 CAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAG 761415 Query 36199 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 36258 | || ||||| || || || ||||| | || || || |||||||| |||||||| || Sbjct 761416 CTTATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGC 761475 Query 36259 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA-TAAGTCTCTCTCCAT 36317 ||| || |||||| |||| |||||||| ||||| |||||| || | | ||||||| Sbjct 761476 AAAAGAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCAT 761534 Query 36318 AACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 36374 | ||| |||| ||||| |||||||| |||||||| |||||||||| Sbjct 761535 AGGTGGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAG 761594 Query 36375 GCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTAT 36434 |||||||||| ||||| || ||||| | | | || || |||||||| |||| Sbjct 761595 GCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTAT 761649 Query 36435 CAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGA 36494 | || | ||||| |||||||| || || |||||||| ||||| || || || || |||| Sbjct 761650 CGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGA 761709 Query 36495 AACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCA 36554 |||| || || || |||||||| |||||| | ||| || || | || |||||||||| Sbjct 761710 AACAGCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCA 761769 Query 36555 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTG 36614 |||| || |||||||| || || || |||| ||||| |||||||||| | || | | Sbjct 761770 CTATGCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAG 761829 Query 36615 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 36674 || | || | ||| | | ||| || || || | ||||| || || ||||||||| Sbjct 761830 GTTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAA 761889 Query 36675 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 36734 ||| ||||| || || |||||||| | ||| || ||||| |||| || ||||| || | Sbjct 761890 GTGAAGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGA 761949 Query 36735 CAAA 36738 |||| Sbjct 761950 CAAA 761953 >seq635 Length=1382696 Score = 264 bits (292), Expect = 1e-65 Identities = 346/474 (73%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 |||||||| |||||| | ||| ||| | || | || |||||||||||| || || | | Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| ||||| || |||||||| || || ||| || | || || | || Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 |||||||||| || || |||||||| ||||| || || || || || |||| || | Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 | || || || | |||||||| | ||| ||||| | | |||| | ||| ||||||| Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383 Query 65079 TTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 | || ||| |||| ||||||||| | || ||||| || || ||||| |||||| Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGATTAACTACTTGAAATTCTCC 65194 ||||| | | | || || | ||| || | ||| ||||| || | ||||||||||| Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502 Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254 || || ||||| |||||||| ||||| |||||||| ||||| | ||||||||||||||| Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562 Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308 || ||| ||||||||||| ||||| ||||| || || | | |||||| || || Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616 >seq62 Length=6363713 Score = 176 bits (194), Expect = 6e-39 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | | ||||||| | ||||| |||| ||| |||||||||||||||||| Sbjct 1589373 TTTTTATTAACTGCCTCCAAAAAGCGCAACAGGTGCAGGAATAGATTGATGATATCCAAG 1589314 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 |||| ||||| | ||||| ||||| |||||||| || || |||| || |||||||| Sbjct 1589313 TAGAGGTTGATGGCAGCTAAGACATACTCTTCAGGTGACAGTCTATGCATCAGTGAGTGT 1589254 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 ||||||||||| |||||||||||||| | |||||| ||| ||||| || ||||| ||| Sbjct 1589253 GTGTCATAGATGATGAATCCGCAGAAAAGAAGGGCTCCACCAGCAGCCATGACCAATTCC 1589194 Query 9411 ACTGTTTCACTTTGCACAAATA 9432 | ||| ||||| | | ||||| Sbjct 1589193 ATTGTCTCACTATAAAAAAATA 1589172 Score = 107 bits (118), Expect = 3e-18 Identities = 87/104 (84%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1555344 CCATTCGGATGTGCACGCTGGCAGACGCCACGTTGCTGCCATAGTTGAAGTCGTCCTCGA 1555285 Query 9907 TGGAGGAGCACGCGTA----GAGGCTCGGCATGGCCATGGCGGC 9946 |||||||||| | ||| ||||| || ||||||| |||| Sbjct 1555284 TGGAGGAGCAAGGGTAACGGGAGGC-AGGATCGGCCATGCCGGC 1555242 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691 ||||||| |||||||||| | || || ||||| |||||||||| ||||||||||||||| Sbjct 1578776 AAATCCAAAAAGCAGGTACAGGTTAAGAGGATGCTTATGTCTGTTTAAAGTCAATGCGAA 1578717 Query 9692 AATCAAGCC 9700 ||| ||||| Sbjct 1578716 AATAAAGCC 1578708 >seq339 Length=2552696 Score = 132 bits (146), Expect = 6e-26 Identities = 106/128 (83%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| || || ||||| |||||||| ||||| |||||||| ||||| | | Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 |||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579 Query 65301 CTATTTCT 65308 || || || Sbjct 2056578 CTGTTCCT 2056571 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || || || || || || || | | Sbjct 2031457 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCAGGA 2031398 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| ||||| ||| |||| || |||| || |||| Sbjct 2031397 TGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTATCCA 2031338 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| |||||| || |||||||| ||||| Sbjct 2031337 GTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCAT 2031292 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || ||||||||||||||||||||| || |||||||| || | || | || |||| | Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564 Query 66116 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCATAATGCC 66174 || || || ||||||||||| || |||||| || |||||| | | || || |||||| Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505 Query 66175 ACGGTTCCA 66183 | ||||||| Sbjct 2043504 ATGGTTCCA 2043496 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || ||||| || || || || |||||||| || || || || || || | Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||||||||| ||||| | ||||| || || || || | || ||||| |||| Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | ||||||||| || ||||| || ||||| || || || || || || | || | Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 2048055 GTTTATTTGA 2048046 >seq446 Length=2046506 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||||| || || ||||| || || || ||||| || || || || | Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| |||||||| ||||| || ||||||||||| |||||||| ||||| ||||||| Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491 Query 36300 C 36300 | Sbjct 492490 C 492490 >seq92 Length=5367877 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | || |||||||| |||||||| ||||| ||||| | ||||| Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||||||||| | || || ||||| |||||||||||||||||||| || || ||||| Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658125057790520