Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq30 104 2e-17
>seq30
Length=8517879
Score = 104 bits (114), Expect = 2e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || |||||||| || | |||||||| || ||||| |||||||||||||
Sbjct 2591519 GCCTTTGCAGCAGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTC 2591578
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|||||||| || ||||| || | | ||||| || ||| | |||||| | || ||
Sbjct 2591579 AAGAAACGAGGACTGATGCCCGGTCTTACATTTTCGAATGAGCTAATTAGCAGAGATGAG 2591638
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901
|| || || ||||| ||||| ||| | ||||
Sbjct 2591639 GGACTCCATTGTGATTTTGCGTGTTTAATGTT 2591670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356208405712609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |