Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq30 104 2e-17 >seq30 Length=8517879 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || |||||||| || | |||||||| || ||||| ||||||||||||| Sbjct 2591519 GCCTTTGCAGCAGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTC 2591578 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| || ||||| || | | ||||| || ||| | |||||| | || || Sbjct 2591579 AAGAAACGAGGACTGATGCCCGGTCTTACATTTTCGAATGAGCTAATTAGCAGAGATGAG 2591638 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 || || || ||||| ||||| ||| | |||| Sbjct 2591639 GGACTCCATTGTGATTTTGCGTGTTTAATGTT 2591670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356208405712609