Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq30 390 2e-103 seq602 379 3e-100 seq418 360 3e-94 seq635 279 7e-70 seq339 129 8e-25 seq446 120 4e-22 seq92 116 5e-21 >seq30 Length=8517879 Score = 390 bits (432), Expect = 2e-103 Identities = 668/963 (69%), Gaps = 16/963 (2%) Strand=Plus/Minus Query 41697 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 41753 ||||||| ||| || ||| |||| |||||| |||| || | |||| ||||| Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978 Query 41754 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 |||| ||||| || ||||| | || || || || | | || | || || ||| Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 41869 || || ||||||||||| || || ||||| || ||||| ||||| || | ||| Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859 Query 41870 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATC 41929 || | || |||| || || | ||| || || | |||||| || || ||||| Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799 Query 41930 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 41989 | || ||||| || || || || ||||| | ||| || || || || ||||| Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739 Query 41990 ATAGAGACCGCGT---CTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT 42046 || ||| || | | ||||| | ||| ||| | | || ||| || | Sbjct 2591738 ATCCTGACAGCATTGACAATTATATTTC-TCTGACTCTCTGCTCCGAAGGTTTATGTAGC 2591680 Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 | |||||| ||||| ||||| || ||||| || || || ||||||||||| ||||||| Sbjct 2591679 AGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGC 2591620 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 || || ||||| || || |||||||| || || || || || ||||| ||||| || ||| Sbjct 2591619 TCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCA 2591560 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || || |||||||||||||||||||| ||||| |||||||| | | | ||||||| Sbjct 2591559 AAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATGG 2591500 Query 42227 CCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 ||| |||| ||||| |||||||| |||||||| |||||||||||| Sbjct 2591499 GTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGC 2591440 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCG 42343 || || || || || || ||||| | | | || || ||||||||| || |||||| Sbjct 2591439 ATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCG 2591380 Query 42344 ATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 42403 || | ||||| |||||||| || || |||||||| ||||| ||||| || || |||||| Sbjct 2591379 ATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAA 2591320 Query 42404 CATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACT 42463 || | ||| || |||| ||| |||||| | ||| || || | || ||||| ||||| Sbjct 2591319 CAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACT 2591260 Query 42464 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGT 42523 || || ||||||||||| || || |||| ||||| |||||||||| | || || ||| Sbjct 2591259 ATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGGT 2591200 Query 42524 GTTA-ATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAA 42582 | | | ||| | | ||| || | || | || || || || | |||||||| Sbjct 2591199 TTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAA 2591140 Query 42583 TGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAAC 42642 ||| || || ||||| |||||||| | |||||||||||| |||| || || || || || Sbjct 2591139 TGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGAC 2591080 Query 42643 AAA 42645 ||| Sbjct 2591079 AAA 2591077 >seq602 Length=1640730 Score = 379 bits (420), Expect = 3e-100 Identities = 650/936 (69%), Gaps = 14/936 (1%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATT 41773 |||| |||||| |||| || | |||| ||| | |||| ||||| || ||||| Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGCCCG-TTGAACTTGACATCACGCCCATC 122164 Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 | | || || || || | || || || ||||| || ||||||||||| || || Sbjct 122165 CTCTAATACTCGCCTACTCTCTTA---AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || ||||| ||||| || | ||| ||| | || |||| || || Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||| || || | |||||| | || ||||| | |||||||| || || || Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 || | ||| | ||| | ||||| || || ||||| || ||| || | || || Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401 Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 ||| ||| | | || ||| || | | |||||| ||||| || || || ||| Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 || || || || ||||||||||| ||||||| | | || ||||| || || || ||||| Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 | || || || || ||||| ||||| || ||||| || | |||||||||||||||||| Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTTT 42250 ||||| |||||||| | | | |||||||| ||| |||| ||||| | Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 |||||||| |||||||| |||||||||||||| || || || || || ||||| | Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | | || || || ||||| || |||||||| | ||||| |||||||| || || Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 |||||||| ||||| ||||| || || |||||||| | ||| || |||| ||| |||||| Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820 Query 42431 GTACAAAATCG-TTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 | ||| || |||| | || ||||| ||||||||||| |||||||| || ||||| || Sbjct 122821 TGGCTAAACCGCTTCA-CCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGC 122879 Query 42490 CAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATC 42549 | ||||| |||||||||| | || || ||| | | | ||| | | ||| || Sbjct 122880 AAGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTC 122939 Query 42550 TTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATT 42609 || || | || || || || | ||||||||||| || || ||||| |||||||| | Sbjct 122940 CTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTG 122999 Query 42610 CCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 |||||||||||| |||| || || || || ||||| Sbjct 123000 CCAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035 >seq418 Length=2079112 Score = 360 bits (398), Expect = 3e-94 Identities = 659/960 (69%), Gaps = 18/960 (2%) Strand=Plus/Plus Query 41697 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 41753 ||||||| ||| || ||| |||| |||||| |||| || | |||| ||||| Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060 Query 41754 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 |||| ||||| | ||||| | || || || || || | || || || || ||| Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 41869 || || ||||||||||| || || ||||| || ||||| ||||| || | ||| Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179 Query 41870 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATC 41929 || | || |||| || || | ||| || || | ||||| || || ||||| Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239 Query 41930 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 41989 | || ||||| || || || || ||||| | ||| | || || || || ||||| Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299 Query 41990 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 42049 || ||| || | || || ||| ||| | | || ||| || | | | Sbjct 761300 ATCCTGACTGCATTGACAATTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGA 761359 Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 ||||| ||||| ||||| || ||||| || || || ||||||||||| ||||||| | Sbjct 761360 TGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTA 761419 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 || ||||| || || || ||||| | || || || |||||||| ||||| || ||||| Sbjct 761420 TTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAA 761479 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA-TAAGTCTCTCTCCATAACC 42228 || |||||| ||||||||||||| ||||| |||||| || | | |||||||| Sbjct 761480 GAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATAGGT 761538 Query 42229 GGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 ||| |||| ||||| |||||||| |||||||| |||||||||||||| Sbjct 761539 GGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCAT 761598 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 || || || || || ||||| | | | || || |||||||| |||||||| Sbjct 761599 TGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATCGAT 761653 Query 42346 CAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 42405 | ||||| |||||||| || || |||||||| ||||| ||||| || || |||||||| Sbjct 761654 GAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACA 761713 Query 42406 TCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTAT 42465 ||||| || |||| ||| |||||| | ||| || || | || ||||| |||||||| Sbjct 761714 GCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTAT 761773 Query 42466 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGT 42525 || |||||||| || || || |||| ||||| |||||||||| | || || ||| | Sbjct 761774 GCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTT 761833 Query 42526 TAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGA 42585 | | ||| | | ||| || || || | || || || || | ||||||| ||| Sbjct 761834 CAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGA 761893 Query 42586 TGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || || || || |||||||| | ||| |||||||| |||| || || || || ||||| Sbjct 761894 AGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953 >seq635 Length=1382696 Score = 279 bits (308), Expect = 7e-70 Identities = 349/474 (74%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || || |||||| | | ||| | | | || | || ||||||||| || || || | | Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | |||| ||||| || |||||||| || || ||| ||| |||| || | ||| Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || ||||||| ||||| |||||||| ||||| || || || || || |||| || | Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 | || || || | |||||||| | ||| ||||| | | |||| | ||| ||||||| Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383 Query 71041 TTTG-TAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 | || ||| |||| ||||||||| | ||| ||||| ||||| |||||||||||| Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||||| | | | || || | ||| || | ||||||||| || | ||||||||||| Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 || || |||||||||||||| ||||| |||||||| ||||| | |||||||||||||| Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCT 71270 || ||| ||||||||||| ||||| ||||| || || | | || ||| || || Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616 >seq339 Length=2552696 Score = 129 bits (142), Expect = 8e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| || || |||||||||||||| ||||| |||||||| ||||| | Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 |||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | || | Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579 Query 71263 CTATTTCTAAGACCAT 71278 || || || | |||| Sbjct 2056578 CTGTTCCTTACTCCAT 2056563 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || || ||||| || | | ||| |||||||| || || || || ||||||| Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||||||||| || || | ||||| || || || || || || ||||| |||| Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | ||||||||| || ||||| || ||||| || || || || || || | ||| | Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 2048055 GTTTATTTGA 2048046 Score = 96.9 bits (106), Expect = 5e-15 Identities = 98/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 |||||||||||||||||||| || |||||||| || | || || || |||| | ||| Sbjct 2043619 ACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCGCTGC 2043560 Query 72082 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 || || ||||||||||| || |||||| || |||||| | | || || ||||||| || Sbjct 2043559 TCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCCATGG 2043501 Query 72141 TTCCA 72145 ||||| Sbjct 2043500 TTCCA 2043496 >seq446 Length=2046506 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||||| || || ||||| || || || ||||| || || || || | Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491 Query 42207 C 42207 | Sbjct 492490 C 492490 >seq92 Length=5367877 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | || |||||||| |||||||| ||||| ||||| | ||||| Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||||||||||| || || ||||| |||||||| ||||||||||| || || ||||| Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671090517240280