Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq339 95.1 2e-14 >seq339 Length=2552696 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 97201 CTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCA 97260 ||||| |||||| || || || ||||| |||||||| ||| | ||||| || |||| Sbjct 2045274 CTCAGACAGAGACGGGCACCCCCTACATGCTCTACAAAGATTCTTGCAATCGGAAGAGCA 2045333 Query 97261 ACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACG 97320 |||| | || |||| |||||||| || |||||||||||| ||| ||||||||||| Sbjct 2045334 ACCAGCAGAACCTGGGAACCATCAAATGCAGCAATCTGTGCACAGAAGTTGTAGAGTACA 2045393 Query 97321 CC 97322 || Sbjct 2045394 CC 2045395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741005445418280