Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq602 203 7e-47
seq30 196 1e-44
seq418 168 2e-36
seq24 150 4e-31
seq802 122 2e-22
seq556 120 7e-22
seq41 120 7e-22
seq608 118 2e-21
seq163 114 3e-20
seq92 111 4e-19
seq501 100 7e-16
seq21 98.7 2e-15
seq380 93.3 1e-13
seq388 87.8 4e-12
seq780 86.0 1e-11
seq951 84.2 5e-11
seq446 84.2 5e-11
>seq602
Length=1640730
Score = 203 bits (224), Expect = 7e-47
Identities = 590/899 (66%), Gaps = 22/899 (2%)
Strand=Plus/Minus
Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762
||||| || ||||| || | | |||||| ||| |||||| || |||||| ||
Sbjct 123035 TTTGTCATCTTTCCCATCAAATACCATGATATCTGGCAGATGTATAAGAAGGCCGAGGCC 122976
Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822
|| |||||||| | || || || || || || | ||| | | ||| | |
Sbjct 122975 TCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCACTGGGAGGCCCTG 122916
Query 268823 AAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGT 268882
||||| || || ||| |||||||| || | ||||| ||||| || | ||||||||
Sbjct 122915 AAACCTGAGGAGAGATATTTTATATCCCATGTGCTTGCTTTTTTCGCGGCCAGTGATGGA 122856
Query 268883 ATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGA 268942
|| || || ||||| | || || ||| | ||||| || |||||| | |||||| |
Sbjct 122855 ATAGTGAATGAAAACTTGGTGAAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCTGC 122796
Query 268943 TGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTA 269002
||||| || || |||||||| || || ||||| || || || || ||||||||||| |
Sbjct 122795 TGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCTC 122736
Query 269003 ATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAAC 269061
|| |||||||| || | || ||| || | | || || || ||| |||| ||
Sbjct 122735 ATCGATACTTACATTAAACATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-AC 122677
Query 269062 TATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATAG 269115
||| ||||| | || || | || ||||| || | ||||| || || ||
Sbjct 122676 AATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGATTGGGGACAAAGA-AG 122618
Query 269116 CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175
| | || || |||||| | |||| || ||||| || || ||||| || |||||||| |
Sbjct 122617 C-CACC-TATGGAGAATGTGTAGTAGCCTTTGCAGCAGTGGAAGGAATCTTCTTTTCTAG 122560
Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235
|||||||| | || || ||| | |||||| |||| | ||||| || | || || ||
Sbjct 122559 TTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGATTGATGCCTGGTCTTACATTTTC 122500
Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295
|| | | | || ||||| || || || | || || || || || |||| || |
Sbjct 122499 GAATGCACTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTAATGTT---- 122444
Query 269296 TAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA--GCT 269353
|| |||| ||| |||||||| | | ||||| ||||| || | ||| |||
Sbjct 122443 CAAACATCTGCTACATAAACCTTCGGAGCAGAGAGTCAGAGAAATAATCG--TCAATGCT 122386
Query 269354 GTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAAT 269413
|| ||||| || || || || || || | | || |||| ||||| ||||||
Sbjct 122385 GTCAGGATAGAACAGGAGTTCCTTACAGAGGCCTTGCCAATAAATCTCATCGGGATGAAT 122326
Query 269414 AGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGG 269473
||| | |||| | || | | | ||||| | || ||| | | || | ||
Sbjct 122325 TGCACTTTAATGAAGCAGTACACTGAATTCGTGGCGGACAGACTTATACTGGAGCTGGGC 122266
Query 269474 TTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAA 269533
|| || ||| | | || || ||||| ||| ||||||||||| || ||||| |||
Sbjct 122265 TTCAGCAAAGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAA 122206
Query 269534 GGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592
|| || |||| ||||| ||| | ||| | | ||| ||| ||||| || |||||
Sbjct 122205 GGCAAAACTAACTTCTT---TAAGAGAGTAGGCGAGTATTAGAGGATGGGCGTGATGTC 122150
>seq30
Length=8517879
Score = 196 bits (216), Expect = 1e-44
Identities = 591/901 (66%), Gaps = 19/901 (2%)
Strand=Plus/Plus
Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762
||||| || ||||| || | | |||||| ||| |||||| || |||||| ||
Sbjct 2591077 TTTGTCATCTTTCCCATCGAATACCATGATATCTGGCAGATGTATAAGAAGGCCGAGGCC 2591136
Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT-T 268821
|| |||||||| | || || || || || || ||| | | ||| | |
Sbjct 2591137 TCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAGGGACATCCAGCACTGGGAGGCCCCT 2591196
Query 268822 AAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGG 268881
||||| || || ||| |||||||| || | || || || || |||| ||||||||
Sbjct 2591197 GAAACCTGAGGAGAGATATTTTATATCCCATGTCCTGGCTTTCTTCGCAGCCAGTGATGG 2591256
Query 268882 TATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAG 268941
|| || | ||||| | || ||| ||| | ||||| || |||||| | |||||| |
Sbjct 2591257 CATAGTGAGTGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCTG 2591316
Query 268942 ATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATT 269001
||||| || || |||||||| || || ||||| || || || || ||||||||||| |
Sbjct 2591317 CTGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCT 2591376
Query 269002 AATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAA 269060
|| |||||||| | | ||| ||| || | | || || || ||| |||| |
Sbjct 2591377 CATCGATACTTACGTTAAAGATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-A 2591435
Query 269061 CTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATA 269114
| ||| ||||| | || || | || ||||| || ||||| || || |
Sbjct 2591436 CAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGTTGGATTGGGGACAAAGA-A 2591494
Query 269115 GCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGG 269174
|| | || | |||||| | |||| || ||||| || || ||||| || |||||||| |
Sbjct 2591495 GC-CACC-CATGGAGAATGTGTAGTAGCCTTTGCAGCAGTTGAAGGAATCTTCTTTTCTG 2591552
Query 269175 GGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCT 269234
| |||||||| | || || ||| | |||||| |||| || ||||| || | || || |
Sbjct 2591553 GTTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGACTGATGCCCGGTCTTACATTTT 2591612
Query 269235 CTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTA 269294
| || || | || ||||| || || || | || || || || || |||||| | ||
Sbjct 2591613 CGAATGAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTTAATGTT-- 2591670
Query 269295 CTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGAT-TCA--G 269351
|| |||| ||| |||||||| | | ||||| |||| |||| | ||| |
Sbjct 2591671 -CAAACATCTGCTACATAAACCTTCGGAGCAGAGAGTCAGAGAAA-TATAATTGTCAATG 2591728
Query 269352 CTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGA 269411
|||| ||||| || || || || | || | | | |||| ||||| ||||
Sbjct 2591729 CTGTCAGGATAGAACAGGAGTTCCTCACAAAGGCCTTGCCAGTGAATCTCATCGGGATGA 2591788
Query 269412 ATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAG 269471
| ||| | |||| | || ||| | ||||| | || ||| | | || | |
Sbjct 2591789 ACTGCACTTTAATGAAGCAGTACATTGAATTCGTGGCCGACAGACTCATACTGGAGCTGG 2591848
Query 269472 GGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531
| || || || | | || || ||||| ||| ||||||||||| || ||||| |
Sbjct 2591849 GCTTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGG 2591908
Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGT 269591
|||| || |||| ||||| ||||| | || | | ||||||| |||||||| ||||
Sbjct 2591909 AAGGCAAAACTAACTTCTTTAAGAAGAGACTAGGCGAGTATCAGAGGATGGGTGTGATGT 2591968
Query 269592 C 269592
|
Sbjct 2591969 C 2591969
>seq418
Length=2079112
Score = 168 bits (186), Expect = 2e-36
Identities = 582/899 (65%), Gaps = 23/899 (3%)
Strand=Plus/Minus
Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762
||||| || ||||| || | | |||||| ||| |||||| || | |||| |||
Sbjct 761953 TTTGTCATCTTTCCCATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCCGAGGCT 761894
Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822
|| ||||||| | || || || || || || | ||| | | ||| | |
Sbjct 761893 TCACTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCACTGGGAGGCCCTG 761834
Query 268823 AAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGT 268882
||||| || || ||| |||||||| || | || || || || || | ||||||||
Sbjct 761833 AAACCTGAGGAGAGATATTTTATATCCCATGTGCTGGCTTTCTTCGCGGCCAGTGATGGC 761774
Query 268883 ATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGA 268942
|| || || ||||| | || ||| ||| | ||||| || |||||| | ||||||||
Sbjct 761773 ATAGTGAATGAAAACTTTGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCAGC 761714
Query 268943 TGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTA 269002
||||| || || |||||||| || || ||||| || || || || ||||||||||| |
Sbjct 761713 TGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCTC 761654
Query 269003 ATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAAC 269061
|| |||||||| | ||| ||| || | | || || || ||| |||| ||
Sbjct 761653 ATCGATACTTA-----AAGATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-AC 761600
Query 269062 TATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATAG 269115
||| ||||| | || || | || ||||| || ||||| || || ||
Sbjct 761599 AATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGA-AG 761541
Query 269116 CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175
| | || || |||||| ||| || ||| || || ||||| || |||| ||| ||
Sbjct 761540 C-CACC-TATGGAGAACATGTAGGAGCCTTTAGAGCAGTGGAAGGAATCTTCTATTCTGG 761483
Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235
|||||||| | || || ||| | |||||| |||| | ||||| || | || || ||
Sbjct 761482 TTCTTTTGCATCCATATTCTGGCTTAAGAAACGAGGATTGATGCCTGGTCTTACATTTTC 761423
Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295
|| | | || ||||| || || || | || || || || || |||||| | ||
Sbjct 761422 GAATAAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTTAATGTT--- 761366
Query 269296 TAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA--GCT 269353
|| |||| ||| ||||||| | | ||||| ||||| || | ||| ||
Sbjct 761365 CAAACATCTGGTACATAAACCTTTGGAGCAGAGAGTCAGAGAAATAATTG--TCAATGCA 761308
Query 269354 GTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAAT 269413
|| ||||| || || || || || || | | | |||| ||||| |||||
Sbjct 761307 GTCAGGATAGAACAGGAGTTCCTCACAGAGGCCTTGCCAGTGAATCTCATCGGGATGAAC 761248
Query 269414 AGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGG 269473
||| | |||| | || ||| | || || | || ||| | | || | ||
Sbjct 761247 TGCACTTTAATGAAGCAGTACATTGAATTTGTGGCGGACAGACTTATACTGGAGCTGGGC 761188
Query 269474 TTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAA 269533
|| || || | | || || ||||| ||| ||||||||||| || ||||| |||
Sbjct 761187 TTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAA 761128
Query 269534 GGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592
|| || |||| ||||| |||||| | ||| | | ||||||| ||||| | |||||
Sbjct 761127 GGCAAAACTAACTTCTTTGAGAAGAGAGTAGGGGAGTATCAGAGGATGGGCATGATGTC 761069
>seq24
Length=8999101
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | ||| || || || ||||| || ||||| || ||||| || |||||
Sbjct 2890518 ACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGAGTATGCCCATCTTCC 2890577
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| || || ||||||||||| || | || || |||||||| || ||||||||||||||
Sbjct 2890578 AGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGG 2890637
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| ||||| ||||| |||| ||||| || || ||||| || || || |||||
Sbjct 2890638 ATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGACCTCGAGCGTGATGGTCTTC 2890697
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| || || || || || |||||||| |||
Sbjct 2890698 CCAGTGAGGGTCTTCACGAAAATCTGCATCTTG 2890730
>seq802
Length=919857
Score = 122 bits (134), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | ||| || || || ||||| || |||| || ||||| |||||||
Sbjct 2881 ACAAGATGAAGTGTGGACTCCTTTTGAATGTTTTAGTGTGACAGAGTAGACCCGTCTTTC 2822
Query 104411 AGTTGTTTTCCAGCAAAAATT-AGCCTCTGTTGATCAGGAGGT---ATTCCTTCTTTATC 104466
|| ||| | |||||||||| | || || || || | |||||| || ||||||||||
Sbjct 2821 AGCTGTATGCCAGCAAAAAATCAGTCTTTGCTGGTTAGGAGGAGGAATGTCTTCTTTATC 2762
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| ||||| ||||| ||| ||||| ||||| ||||||||||| || ||
Sbjct 2761 CTAGATCTTGGCTTTCACATTCTCTGTAGTATCTGAGGGTTCGACCTCTAGTGTGATTGT 2702
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || || | || ||||||||
Sbjct 2701 CTTCCCAGTGAGGGTCTTCATGAAAATCTGCAT 2669
>seq556
Length=1594741
Score = 120 bits (132), Expect = 7e-22
Identities = 131/173 (76%), Gaps = 6/173 (3%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || ||||| || |||||| | || | || ||||||
Sbjct 329495 ACAAGATGAAGTG--GACTCCTTTTGAATTTTGTAGTCAAA----GTACGCCCATCTTCT 329548
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|||||||| | |||||||||||| || || ||||||||||| || ||||||||||||||
Sbjct 329549 AGTTGTTTGCTAGCAAAAATTAGTCTTTGCTGATCAGGAGGAATACCTTCTTTATCCTGG 329608
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAAT 104523
||||| ||||| || || | || |||||| | ||| ||||| || | |||
Sbjct 329609 ATCTTGGCTTTCACGTTCTTTATGGTATCTGATGATTCAACCTCGAGAGAAAT 329661
>seq41
Length=6870668
Score = 120 bits (132), Expect = 7e-22
Identities = 145/195 (74%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|||| ||| | || |||||||| ||||| | | |||||| || || || ||||||||
Sbjct 2879639 TCTTCCTGGCTGTTGTAGTCAGAAAGAGTGCAGCTGTCTTCCAGCTGCTTGCCAGCAAAG 2879698
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| |||||||| || || || | || ||||| ||||| || |||| || || |||||
Sbjct 2879699 ATGAGCCTCTGCTGGTCGGGGG--ATGCCTTCCTTATC-TGGGTCTTGGCCTTCACATTC 2879755
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | |||||||||||||| || || || || || || || ||| | || || || ||
Sbjct 2879756 TCGATGGTATCGCTAGGTTTCACTTCCAGGGTGATGGTTTTGCCATTCAGGGTCTTCACG 2879815
Query 104549 AATATCTGCATTTTG 104563
|| || |||||||||
Sbjct 2879816 AAGATTTGCATTTTG 2879830
>seq608
Length=1396534
Score = 118 bits (130), Expect = 2e-21
Identities = 136/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 104371 TTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAAT 104430
|||||| || || |||||||| ||||| | || ||||| | || ||||||||||| ||
Sbjct 1124014 TTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAACTGCTTTCCAGCAAAGAT 1123955
Query 104431 TAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490
|||||||| ||||||| | || ||||| |||||||| ||||| || || ||||| ||
Sbjct 1123954 GAGCCTCTGCTGATCAGAGAGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTC 1123895
Query 104491 TACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || ||| || |||| | || || || || || || |||| || | || |||||
Sbjct 1123894 TATGGAATCACTGAGTTCCATTTCCAGGGTGATGGTTTTGTCAGTCAGGATCTTCACAAA 1123835
Query 104551 TAT 104553
||
Sbjct 1123834 GAT 1123832
>seq163
Length=3864798
Score = 114 bits (126), Expect = 3e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 78488 GCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATC 78547
|| || |||||||| | ||| ||||||||| | || || | || || | || || |||
Sbjct 18375 GCTTTGTGGTGGTACTTTATATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATC 18434
Query 78548 CTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTT 78607
|| | |||||| |||||| | ||| || |||||||||||||||| ||| ||||||
Sbjct 18435 CTGAGGAAGAAAAACAATCAAGTCTCTTTCCTTCATGTATATCATCATTGTACAATGTTT 18494
Query 78608 ACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650
|| || | ||||| || ||||| ||| | |||||||||||||
Sbjct 18495 ACACTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAAG 18537
>seq92
Length=5367877
Score = 111 bits (122), Expect = 4e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
|| |||||| | || || || || ||||||||||| || |||||||| || ||||| ||
Sbjct 3850781 GGGGAAAGGGTGGTAGCCTTCGCTGCTGTAGAAGGAATTTTCTTTTCAGGATCTTTCGCT 3850840
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245
||||| |||||| | || ||||||||||| ||||| ||| | ||||| || || || |
Sbjct 3850841 GCTATATTTTGGCTAAAAAAAAGAGGCCTCATGCCTGGACTCACTTTTTCCAATGAGCTC 3850900
Query 269246 ATAAGCAGGGACGAAG 269261
|| ||||| || ||||
Sbjct 3850901 ATCAGCAGAGATGAAG 3850916
>seq501
Length=1755529
Score = 100 bits (110), Expect = 7e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| || || | ||| || || || ||| | || |||||||| | ||| | || ||||||
Sbjct 1647415 ACAAGGTGAAGTGTGGACTCCTTTTGAGTCTTGTAGTCAGACAAAGTACGCCCATCTTCT 1647356
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| || | ||||||||| ||| || | ||||||||||| |||||||||||||| ||
Sbjct 1647355 AGAGGTCTGCCAGCAAAATTTAATCTTGGCTGATCAGGAGGAATTCCTTCTTTATCTTGG 1647296
Query 104471 ATCTTTGCTTTTACATTT 104488
| ||| ||||||| ||||
Sbjct 1647295 ACCTTGGCTTTTATATTT 1647278
>seq21
Length=9016915
Score = 98.7 bits (108), Expect = 2e-15
Identities = 118/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| |||||||||||||| || |||||| || | || | |||||||| ||| ||||
Sbjct 5151933 CCATCTTCTAGTTGTTTGCCCATAAAAATCAGTTTTTGCTCTTCAGGAGGAATTATTTCT 5151992
Query 104462 TTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520
|||||||| ||||| | |||| | ||| ||||| ||||| ||||| ||||| || |
Sbjct 5151993 TTATCCTGGATCTTGGTTTTTCAAATTCTCTACAGTATCTGAGGGTTCAACCTCAAGCAT 5152052
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| ||| || | || ||||| | || ||||||||
Sbjct 5152053 GATAGCCTTCCCTGGGAGGGTTTTCCCGAAAATCTGCAT 5152091
>seq380
Length=2352794
Score = 93.3 bits (102), Expect = 1e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 65778 TCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATCTATAACA 65837
||||| || |||||||||| || | | ||| || ||||| || || |||||| |||
Sbjct 2067102 TCCTTGCCAAAATTAAATAGTACAACACAAACGTTTCCTCTGTAATCATCATCTATGACA 2067043
Query 65838 CCAGCACCTACATCTATAAAGTAATTATACGCTAATCCAGATCGGGGAGCTATTCTACCA 65897
||||| ||||||||||| |||| || | ||||| ||||| | ||||||| ||| |||
Sbjct 2067042 CCAGCTCCTACATCTATGAAGTGTTTTTCAGCTAAGCCAGAACTTGGAGCTACTCTTCCA 2066983
Query 65898 TAATATCCTCTAGGAA 65913
||| | || |||||
Sbjct 2066982 TAACAGCCAGAAGGAA 2066967
>seq388
Length=2427621
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437
|| || |||||||| ||| | | || ||||| || | || ||||| || | ||||||
Sbjct 1123330 ATGTTGTAGTCAGAAAGAATGCAGCCATCTTCCAGCTTCTTGCCAGCCAAGAAGAGCCTC 1123389
Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497
|| || | |||||| || ||||| ||| |||| ||||| || || | || || ||||
Sbjct 1123390 TGCTGGTTAGGAGGGATGCCTTCCTTAGCCTGGATCTTAGCCTTCATGTTCTCAGTGGTA 1123449
Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557
|| ||||| | || || || || || |||| | | || || || | || ||||||
Sbjct 1123450 TCACTAGGCTGCACTTCCAGGGTGATGATCTTCCTGGACAGAGTATTGATGAAGATCTGC 1123509
Query 104558 ATTTTG 104563
||||||
Sbjct 1123510 ATTTTG 1123515
>seq780
Length=986417
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/167 (72%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|||||||| || || |||||||| ||||| | || ||||| || || || || |||
Sbjct 703802 TCTTTCTGGATGTTGTAGTCAGAGAGAGTACAACTATCTTCCAGCTGCTTGTCAT-AAAG 703744
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| ||||| || || ||||| | | ||||||||||||| ||||| | || |||||
Sbjct 703743 ATGAGCCTGTGGTGCTCAGGGGAGAAGCCTTCTTTATCCTAGATCTTGACCTTCACATTC 703684
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
| || ||| || || || | ||| || || || ||||| |||||
Sbjct 703683 TTAGTGGCATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGT 703637
>seq951
Length=571157
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/188 (72%), Gaps = 7/188 (4%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| ||||| | || || ||| || |||||||| | | || | |||||
Sbjct 473234 ACAAGATGAAATGTGAACTCCTTTTGACG-TTGTAGTCAGA--GTATGCT--CATCTTCA 473288
Query 104411 AGTTGTTTTCCAGCAAAAATT-AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
|| ||| |||||||||| | || || || || ||||||| || ||||||||||||||
Sbjct 473289 AGCAATTTGCCAGCAAAAAATCAGTCT-TGCTGGTCAGGAGAAATCCCTTCTTTATCCTG 473347
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||||| ||||| ||||| | || | ||| ||||| ||||| || | || |||||
Sbjct 473348 TATCTTGGCTTTCACATTCTATATAGGATCTGAGGGTTCAACCTCGAGCATTATCGTCTT 473407
Query 104530 ACCAGTAA 104537
|||| ||
Sbjct 473408 CCCAGCAA 473415
>seq446
Length=2046506
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975
||||| || |||||| | |||||| | ||||| || || |||||||| || || |||||
Sbjct 489411 CAAGAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAAC 489470
Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
|| || || || ||||||||||| | || |||||||| ||
Sbjct 489471 ATACACTCTGAAATGTACAGTCTCCTCATCGATACTTACAT 489511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151312792449524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |