Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq602 203 7e-47 seq30 196 1e-44 seq418 168 2e-36 seq24 150 4e-31 seq802 122 2e-22 seq556 120 7e-22 seq41 120 7e-22 seq608 118 2e-21 seq163 114 3e-20 seq92 111 4e-19 seq501 100 7e-16 seq21 98.7 2e-15 seq380 93.3 1e-13 seq388 87.8 4e-12 seq780 86.0 1e-11 seq951 84.2 5e-11 seq446 84.2 5e-11 >seq602 Length=1640730 Score = 203 bits (224), Expect = 7e-47 Identities = 590/899 (66%), Gaps = 22/899 (2%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| || ||||| || | | |||||| ||| |||||| || |||||| || Sbjct 123035 TTTGTCATCTTTCCCATCAAATACCATGATATCTGGCAGATGTATAAGAAGGCCGAGGCC 122976 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822 || |||||||| | || || || || || || | ||| | | ||| | | Sbjct 122975 TCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCACTGGGAGGCCCTG 122916 Query 268823 AAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGT 268882 ||||| || || ||| |||||||| || | ||||| ||||| || | |||||||| Sbjct 122915 AAACCTGAGGAGAGATATTTTATATCCCATGTGCTTGCTTTTTTCGCGGCCAGTGATGGA 122856 Query 268883 ATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGA 268942 || || || ||||| | || || ||| | ||||| || |||||| | |||||| | Sbjct 122855 ATAGTGAATGAAAACTTGGTGAAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCTGC 122796 Query 268943 TGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTA 269002 ||||| || || |||||||| || || ||||| || || || || ||||||||||| | Sbjct 122795 TGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCTC 122736 Query 269003 ATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAAC 269061 || |||||||| || | || ||| || | | || || || ||| |||| || Sbjct 122735 ATCGATACTTACATTAAACATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-AC 122677 Query 269062 TATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATAG 269115 ||| ||||| | || || | || ||||| || | ||||| || || || Sbjct 122676 AATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGATTGGGGACAAAGA-AG 122618 Query 269116 CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175 | | || || |||||| | |||| || ||||| || || ||||| || |||||||| | Sbjct 122617 C-CACC-TATGGAGAATGTGTAGTAGCCTTTGCAGCAGTGGAAGGAATCTTCTTTTCTAG 122560 Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235 |||||||| | || || ||| | |||||| |||| | ||||| || | || || || Sbjct 122559 TTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGATTGATGCCTGGTCTTACATTTTC 122500 Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 || | | | || ||||| || || || | || || || || || |||| || | Sbjct 122499 GAATGCACTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTAATGTT---- 122444 Query 269296 TAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA--GCT 269353 || |||| ||| |||||||| | | ||||| ||||| || | ||| ||| Sbjct 122443 CAAACATCTGCTACATAAACCTTCGGAGCAGAGAGTCAGAGAAATAATCG--TCAATGCT 122386 Query 269354 GTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAAT 269413 || ||||| || || || || || || | | || |||| ||||| |||||| Sbjct 122385 GTCAGGATAGAACAGGAGTTCCTTACAGAGGCCTTGCCAATAAATCTCATCGGGATGAAT 122326 Query 269414 AGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGG 269473 ||| | |||| | || | | | ||||| | || ||| | | || | || Sbjct 122325 TGCACTTTAATGAAGCAGTACACTGAATTCGTGGCGGACAGACTTATACTGGAGCTGGGC 122266 Query 269474 TTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAA 269533 || || ||| | | || || ||||| ||| ||||||||||| || ||||| ||| Sbjct 122265 TTCAGCAAAGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAA 122206 Query 269534 GGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 || || |||| ||||| ||| | ||| | | ||| ||| ||||| || ||||| Sbjct 122205 GGCAAAACTAACTTCTT---TAAGAGAGTAGGCGAGTATTAGAGGATGGGCGTGATGTC 122150 >seq30 Length=8517879 Score = 196 bits (216), Expect = 1e-44 Identities = 591/901 (66%), Gaps = 19/901 (2%) Strand=Plus/Plus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| || ||||| || | | |||||| ||| |||||| || |||||| || Sbjct 2591077 TTTGTCATCTTTCCCATCGAATACCATGATATCTGGCAGATGTATAAGAAGGCCGAGGCC 2591136 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT-T 268821 || |||||||| | || || || || || || ||| | | ||| | | Sbjct 2591137 TCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAGGGACATCCAGCACTGGGAGGCCCCT 2591196 Query 268822 AAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGG 268881 ||||| || || ||| |||||||| || | || || || || |||| |||||||| Sbjct 2591197 GAAACCTGAGGAGAGATATTTTATATCCCATGTCCTGGCTTTCTTCGCAGCCAGTGATGG 2591256 Query 268882 TATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAG 268941 || || | ||||| | || ||| ||| | ||||| || |||||| | |||||| | Sbjct 2591257 CATAGTGAGTGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCTG 2591316 Query 268942 ATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATT 269001 ||||| || || |||||||| || || ||||| || || || || ||||||||||| | Sbjct 2591317 CTGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCT 2591376 Query 269002 AATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAA 269060 || |||||||| | | ||| ||| || | | || || || ||| |||| | Sbjct 2591377 CATCGATACTTACGTTAAAGATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-A 2591435 Query 269061 CTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATA 269114 | ||| ||||| | || || | || ||||| || ||||| || || | Sbjct 2591436 CAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGTTGGATTGGGGACAAAGA-A 2591494 Query 269115 GCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGG 269174 || | || | |||||| | |||| || ||||| || || ||||| || |||||||| | Sbjct 2591495 GC-CACC-CATGGAGAATGTGTAGTAGCCTTTGCAGCAGTTGAAGGAATCTTCTTTTCTG 2591552 Query 269175 GGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCT 269234 | |||||||| | || || ||| | |||||| |||| || ||||| || | || || | Sbjct 2591553 GTTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGACTGATGCCCGGTCTTACATTTT 2591612 Query 269235 CTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTA 269294 | || || | || ||||| || || || | || || || || || |||||| | || Sbjct 2591613 CGAATGAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTTAATGTT-- 2591670 Query 269295 CTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGAT-TCA--G 269351 || |||| ||| |||||||| | | ||||| |||| |||| | ||| | Sbjct 2591671 -CAAACATCTGCTACATAAACCTTCGGAGCAGAGAGTCAGAGAAA-TATAATTGTCAATG 2591728 Query 269352 CTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGA 269411 |||| ||||| || || || || | || | | | |||| ||||| |||| Sbjct 2591729 CTGTCAGGATAGAACAGGAGTTCCTCACAAAGGCCTTGCCAGTGAATCTCATCGGGATGA 2591788 Query 269412 ATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAG 269471 | ||| | |||| | || ||| | ||||| | || ||| | | || | | Sbjct 2591789 ACTGCACTTTAATGAAGCAGTACATTGAATTCGTGGCCGACAGACTCATACTGGAGCTGG 2591848 Query 269472 GGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531 | || || || | | || || ||||| ||| ||||||||||| || ||||| | Sbjct 2591849 GCTTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGG 2591908 Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGT 269591 |||| || |||| ||||| ||||| | || | | ||||||| |||||||| |||| Sbjct 2591909 AAGGCAAAACTAACTTCTTTAAGAAGAGACTAGGCGAGTATCAGAGGATGGGTGTGATGT 2591968 Query 269592 C 269592 | Sbjct 2591969 C 2591969 >seq418 Length=2079112 Score = 168 bits (186), Expect = 2e-36 Identities = 582/899 (65%), Gaps = 23/899 (3%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| || ||||| || | | |||||| ||| |||||| || | |||| ||| Sbjct 761953 TTTGTCATCTTTCCCATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCCGAGGCT 761894 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822 || ||||||| | || || || || || || | ||| | | ||| | | Sbjct 761893 TCACTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCACTGGGAGGCCCTG 761834 Query 268823 AAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGT 268882 ||||| || || ||| |||||||| || | || || || || || | |||||||| Sbjct 761833 AAACCTGAGGAGAGATATTTTATATCCCATGTGCTGGCTTTCTTCGCGGCCAGTGATGGC 761774 Query 268883 ATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGA 268942 || || || ||||| | || ||| ||| | ||||| || |||||| | |||||||| Sbjct 761773 ATAGTGAATGAAAACTTTGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCAGC 761714 Query 268943 TGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTA 269002 ||||| || || |||||||| || || ||||| || || || || ||||||||||| | Sbjct 761713 TGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTCCTC 761654 Query 269003 ATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAAC 269061 || |||||||| | ||| ||| || | | || || || ||| |||| || Sbjct 761653 ATCGATACTTA-----AAGATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG-AC 761600 Query 269062 TATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATAG 269115 ||| ||||| | || || | || ||||| || ||||| || || || Sbjct 761599 AATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGA-AG 761541 Query 269116 CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175 | | || || |||||| ||| || ||| || || ||||| || |||| ||| || Sbjct 761540 C-CACC-TATGGAGAACATGTAGGAGCCTTTAGAGCAGTGGAAGGAATCTTCTATTCTGG 761483 Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235 |||||||| | || || ||| | |||||| |||| | ||||| || | || || || Sbjct 761482 TTCTTTTGCATCCATATTCTGGCTTAAGAAACGAGGATTGATGCCTGGTCTTACATTTTC 761423 Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 || | | || ||||| || || || | || || || || || |||||| | || Sbjct 761422 GAATAAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTTAATGTT--- 761366 Query 269296 TAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA--GCT 269353 || |||| ||| ||||||| | | ||||| ||||| || | ||| || Sbjct 761365 CAAACATCTGGTACATAAACCTTTGGAGCAGAGAGTCAGAGAAATAATTG--TCAATGCA 761308 Query 269354 GTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAAT 269413 || ||||| || || || || || || | | | |||| ||||| ||||| Sbjct 761307 GTCAGGATAGAACAGGAGTTCCTCACAGAGGCCTTGCCAGTGAATCTCATCGGGATGAAC 761248 Query 269414 AGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGG 269473 ||| | |||| | || ||| | || || | || ||| | | || | || Sbjct 761247 TGCACTTTAATGAAGCAGTACATTGAATTTGTGGCGGACAGACTTATACTGGAGCTGGGC 761188 Query 269474 TTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAA 269533 || || || | | || || ||||| ||| ||||||||||| || ||||| ||| Sbjct 761187 TTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAA 761128 Query 269534 GGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 || || |||| ||||| |||||| | ||| | | ||||||| ||||| | ||||| Sbjct 761127 GGCAAAACTAACTTCTTTGAGAAGAGAGTAGGGGAGTATCAGAGGATGGGCATGATGTC 761069 >seq24 Length=8999101 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||| || || || ||||| || ||||| || ||||| || ||||| Sbjct 2890518 ACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGAGTATGCCCATCTTCC 2890577 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || ||||||||||| || | || || |||||||| || |||||||||||||| Sbjct 2890578 AGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGG 2890637 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| ||||| ||||| |||| ||||| || || ||||| || || || ||||| Sbjct 2890638 ATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGACCTCGAGCGTGATGGTCTTC 2890697 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| || || || || || |||||||| ||| Sbjct 2890698 CCAGTGAGGGTCTTCACGAAAATCTGCATCTTG 2890730 >seq802 Length=919857 Score = 122 bits (134), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||| || || || ||||| || |||| || ||||| ||||||| Sbjct 2881 ACAAGATGAAGTGTGGACTCCTTTTGAATGTTTTAGTGTGACAGAGTAGACCCGTCTTTC 2822 Query 104411 AGTTGTTTTCCAGCAAAAATT-AGCCTCTGTTGATCAGGAGGT---ATTCCTTCTTTATC 104466 || ||| | |||||||||| | || || || || | |||||| || |||||||||| Sbjct 2821 AGCTGTATGCCAGCAAAAAATCAGTCTTTGCTGGTTAGGAGGAGGAATGTCTTCTTTATC 2762 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| ||||| ||||| ||| ||||| ||||| ||||||||||| || || Sbjct 2761 CTAGATCTTGGCTTTCACATTCTCTGTAGTATCTGAGGGTTCGACCTCTAGTGTGATTGT 2702 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || | || |||||||| Sbjct 2701 CTTCCCAGTGAGGGTCTTCATGAAAATCTGCAT 2669 >seq556 Length=1594741 Score = 120 bits (132), Expect = 7e-22 Identities = 131/173 (76%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||| | || | || |||||| Sbjct 329495 ACAAGATGAAGTG--GACTCCTTTTGAATTTTGTAGTCAAA----GTACGCCCATCTTCT 329548 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 |||||||| | |||||||||||| || || ||||||||||| || |||||||||||||| Sbjct 329549 AGTTGTTTGCTAGCAAAAATTAGTCTTTGCTGATCAGGAGGAATACCTTCTTTATCCTGG 329608 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAAT 104523 ||||| ||||| || || | || |||||| | ||| ||||| || | ||| Sbjct 329609 ATCTTGGCTTTCACGTTCTTTATGGTATCTGATGATTCAACCTCGAGAGAAAT 329661 >seq41 Length=6870668 Score = 120 bits (132), Expect = 7e-22 Identities = 145/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||| ||| | || |||||||| ||||| | | |||||| || || || |||||||| Sbjct 2879639 TCTTCCTGGCTGTTGTAGTCAGAAAGAGTGCAGCTGTCTTCCAGCTGCTTGCCAGCAAAG 2879698 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| || || || | || ||||| ||||| || |||| || || ||||| Sbjct 2879699 ATGAGCCTCTGCTGGTCGGGGG--ATGCCTTCCTTATC-TGGGTCTTGGCCTTCACATTC 2879755 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||||||||||| || || || || || || || ||| | || || || || Sbjct 2879756 TCGATGGTATCGCTAGGTTTCACTTCCAGGGTGATGGTTTTGCCATTCAGGGTCTTCACG 2879815 Query 104549 AATATCTGCATTTTG 104563 || || ||||||||| Sbjct 2879816 AAGATTTGCATTTTG 2879830 >seq608 Length=1396534 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 104371 TTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAAT 104430 |||||| || || |||||||| ||||| | || ||||| | || ||||||||||| || Sbjct 1124014 TTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAACTGCTTTCCAGCAAAGAT 1123955 Query 104431 TAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490 |||||||| ||||||| | || ||||| |||||||| ||||| || || ||||| || Sbjct 1123954 GAGCCTCTGCTGATCAGAGAGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTC 1123895 Query 104491 TACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || || ||| || |||| | || || || || || || |||| || | || ||||| Sbjct 1123894 TATGGAATCACTGAGTTCCATTTCCAGGGTGATGGTTTTGTCAGTCAGGATCTTCACAAA 1123835 Query 104551 TAT 104553 || Sbjct 1123834 GAT 1123832 >seq163 Length=3864798 Score = 114 bits (126), Expect = 3e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 78488 GCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATC 78547 || || |||||||| | ||| ||||||||| | || || | || || | || || ||| Sbjct 18375 GCTTTGTGGTGGTACTTTATATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATC 18434 Query 78548 CTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTT 78607 || | |||||| |||||| | ||| || |||||||||||||||| ||| |||||| Sbjct 18435 CTGAGGAAGAAAAACAATCAAGTCTCTTTCCTTCATGTATATCATCATTGTACAATGTTT 18494 Query 78608 ACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650 || || | ||||| || ||||| ||| | ||||||||||||| Sbjct 18495 ACACTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAAG 18537 >seq92 Length=5367877 Score = 111 bits (122), Expect = 4e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 || |||||| | || || || || ||||||||||| || |||||||| || ||||| || Sbjct 3850781 GGGGAAAGGGTGGTAGCCTTCGCTGCTGTAGAAGGAATTTTCTTTTCAGGATCTTTCGCT 3850840 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| |||||| | || ||||||||||| ||||| ||| | ||||| || || || | Sbjct 3850841 GCTATATTTTGGCTAAAAAAAAGAGGCCTCATGCCTGGACTCACTTTTTCCAATGAGCTC 3850900 Query 269246 ATAAGCAGGGACGAAG 269261 || ||||| || |||| Sbjct 3850901 ATCAGCAGAGATGAAG 3850916 >seq501 Length=1755529 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || || || | ||| || || || ||| | || |||||||| | ||| | || |||||| Sbjct 1647415 ACAAGGTGAAGTGTGGACTCCTTTTGAGTCTTGTAGTCAGACAAAGTACGCCCATCTTCT 1647356 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || | ||||||||| ||| || | ||||||||||| |||||||||||||| || Sbjct 1647355 AGAGGTCTGCCAGCAAAATTTAATCTTGGCTGATCAGGAGGAATTCCTTCTTTATCTTGG 1647296 Query 104471 ATCTTTGCTTTTACATTT 104488 | ||| ||||||| |||| Sbjct 1647295 ACCTTGGCTTTTATATTT 1647278 >seq21 Length=9016915 Score = 98.7 bits (108), Expect = 2e-15 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || |||||||||||||| || |||||| || | || | |||||||| ||| |||| Sbjct 5151933 CCATCTTCTAGTTGTTTGCCCATAAAAATCAGTTTTTGCTCTTCAGGAGGAATTATTTCT 5151992 Query 104462 TTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 |||||||| ||||| | |||| | ||| ||||| ||||| ||||| ||||| || | Sbjct 5151993 TTATCCTGGATCTTGGTTTTTCAAATTCTCTACAGTATCTGAGGGTTCAACCTCAAGCAT 5152052 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||| || | || ||||| | || |||||||| Sbjct 5152053 GATAGCCTTCCCTGGGAGGGTTTTCCCGAAAATCTGCAT 5152091 >seq380 Length=2352794 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 65778 TCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATCTATAACA 65837 ||||| || |||||||||| || | | ||| || ||||| || || |||||| ||| Sbjct 2067102 TCCTTGCCAAAATTAAATAGTACAACACAAACGTTTCCTCTGTAATCATCATCTATGACA 2067043 Query 65838 CCAGCACCTACATCTATAAAGTAATTATACGCTAATCCAGATCGGGGAGCTATTCTACCA 65897 ||||| ||||||||||| |||| || | ||||| ||||| | ||||||| ||| ||| Sbjct 2067042 CCAGCTCCTACATCTATGAAGTGTTTTTCAGCTAAGCCAGAACTTGGAGCTACTCTTCCA 2066983 Query 65898 TAATATCCTCTAGGAA 65913 ||| | || ||||| Sbjct 2066982 TAACAGCCAGAAGGAA 2066967 >seq388 Length=2427621 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437 || || |||||||| ||| | | || ||||| || | || ||||| || | |||||| Sbjct 1123330 ATGTTGTAGTCAGAAAGAATGCAGCCATCTTCCAGCTTCTTGCCAGCCAAGAAGAGCCTC 1123389 Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497 || || | |||||| || ||||| ||| |||| ||||| || || | || || |||| Sbjct 1123390 TGCTGGTTAGGAGGGATGCCTTCCTTAGCCTGGATCTTAGCCTTCATGTTCTCAGTGGTA 1123449 Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557 || ||||| | || || || || || |||| | | || || || | || |||||| Sbjct 1123450 TCACTAGGCTGCACTTCCAGGGTGATGATCTTCCTGGACAGAGTATTGATGAAGATCTGC 1123509 Query 104558 ATTTTG 104563 |||||| Sbjct 1123510 ATTTTG 1123515 >seq780 Length=986417 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| || || |||||||| ||||| | || ||||| || || || || ||| Sbjct 703802 TCTTTCTGGATGTTGTAGTCAGAGAGAGTACAACTATCTTCCAGCTGCTTGTCAT-AAAG 703744 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || ||||| || || ||||| | | ||||||||||||| ||||| | || ||||| Sbjct 703743 ATGAGCCTGTGGTGCTCAGGGGAGAAGCCTTCTTTATCCTAGATCTTGACCTTCACATTC 703684 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | || ||| || || || | ||| || || || ||||| ||||| Sbjct 703683 TTAGTGGCATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGT 703637 >seq951 Length=571157 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/188 (72%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| ||||| | || || ||| || |||||||| | | || | ||||| Sbjct 473234 ACAAGATGAAATGTGAACTCCTTTTGACG-TTGTAGTCAGA--GTATGCT--CATCTTCA 473288 Query 104411 AGTTGTTTTCCAGCAAAAATT-AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || ||| |||||||||| | || || || || ||||||| || |||||||||||||| Sbjct 473289 AGCAATTTGCCAGCAAAAAATCAGTCT-TGCTGGTCAGGAGAAATCCCTTCTTTATCCTG 473347 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| ||||| ||||| | || | ||| ||||| ||||| || | || ||||| Sbjct 473348 TATCTTGGCTTTCACATTCTATATAGGATCTGAGGGTTCAACCTCGAGCATTATCGTCTT 473407 Query 104530 ACCAGTAA 104537 |||| || Sbjct 473408 CCCAGCAA 473415 >seq446 Length=2046506 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 ||||| || |||||| | |||||| | ||||| || || |||||||| || || ||||| Sbjct 489411 CAAGAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAAC 489470 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 || || || || ||||||||||| | || |||||||| || Sbjct 489471 ATACACTCTGAAATGTACAGTCTCCTCATCGATACTTACAT 489511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151312792449524