Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq70 134 1e-26
>seq70
Length=5737579
Score = 134 bits (148), Expect = 1e-26
Identities = 153/204 (75%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 127249 ATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACATTGAGACTTCGACTGCGT 127308
|| || || || || || |||||||| ||||| |||||||| | || || | |||||
Sbjct 5258847 ATCAAGGAGCATGTGAACTCCCTGGGGGAAAAACTGAAGACCCTCAGGCTGAGGCTGCGA 5258788
Query 127309 CGCTGCCACCGCTTTCTCCCGTGCGAGAACAAGAGCAAGGCGGTGGAAAAGGTGAAGAGA 127368
|||| || || || | || || || || || |||||||| ||||| |||||||||
Sbjct 5258787 TGCTGTCATCGATTCTTGCCCTGTGAAAATAAAAGCAAGGCAGTGGAGAAGGTGAAGGAT 5258728
Query 127369 GTGTTCAGCGAGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTC 127428
| || || |||| || || | ||| || ||||| |||||||||||| ||||||| ||
Sbjct 5258727 GCCTTTAGTAAGCTCCAAGAGAAAGGAGTTTACAAAGCCATGAGTGAG-TTGACATCTTT 5258669
Query 127429 ATCAACTACATCGAGACTTACATG 127452
||||||||||| || || ||||||
Sbjct 5258668 ATCAACTACATAGAAACCTACATG 5258645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430023984805736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |