Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq30 423 2e-113
seq602 417 1e-111
seq418 387 2e-102
seq635 260 2e-64
seq339 127 3e-24
seq92 125 9e-24
seq446 120 4e-22
>seq30
Length=8517879
Score = 423 bits (468), Expect = 2e-113
Identities = 677/966 (70%), Gaps = 16/966 (2%)
Strand=Plus/Minus
Query 32933 AACAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTAT 32989
|| ||||||| ||| || ||| |||| |||||| |||| || | |||| || |
Sbjct 2592040 AAAAAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGT 2591981
Query 32990 CTTCTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 33045
| |||| ||||| || ||||| | || || || || | | || | || ||
Sbjct 2591980 CCG-TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAG 2591922
Query 33046 TTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAA 33105
|||||||| ||||||||||| || || ||||| || ||||| ||||| || | ||
Sbjct 2591921 TTAGTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAA 2591862
Query 33106 AtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTC 33165
| || | || |||| || || | ||| || || |||||||| || || |||
Sbjct 2591861 ACCTTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTC 2591802
Query 33166 ATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 33225
|| | || ||||| || || || || ||||| | ||| || || || || |||
Sbjct 2591801 ATTAAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGT 2591742
Query 33226 TCAATGGATACCGCAT---CTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGC 33282
|| || || |||| | ||||| | ||| || | | || ||| |||
Sbjct 2591741 TCTATCCTGACAGCATTGACAATTATATTTC-TCTGACTCTCTGCTCCGAAGGTTTATGT 2591683
Query 33283 AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATT 33342
| | |||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||
Sbjct 2591682 AGCAGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATT 2591623
Query 33343 AGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAA 33402
|| || || ||||| || || |||||||| || || || || || ||||| ||||||||
Sbjct 2591622 AGCTCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGAT 2591563
Query 33403 GCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA 33462
|| || || |||||||||||||||||||| ||||| |||||||| | | | ||||||
Sbjct 2591562 GCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCA 2591503
Query 33463 TAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 33519
| ||| |||| ||||| |||||||| |||||||| |||||||||
Sbjct 2591502 TGGGTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAA 2591443
Query 33520 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 33579
||||| || || || || || ||||| | | | || || ||||||||| ||||||
Sbjct 2591442 GGCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTA 2591383
Query 33580 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 33639
||||| | ||||| |||||||| || || |||||||| ||||| ||||| || || |||
Sbjct 2591382 TCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAG 2591323
Query 33640 AAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTC 33699
||||| | || || |||||||| |||||| | ||| || ||| |||| |||||| ||
Sbjct 2591322 AAACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTC 2591263
Query 33700 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 33759
||||| || ||||||||||| || || |||| ||||| |||||||||| | || ||
Sbjct 2591262 ACTATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCA 2591203
Query 33760 GGTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCA 33818
||| | | | | ||| | | ||| || | || | || || || || |||||||
Sbjct 2591202 GGTTTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCA 2591143
Query 33819 AAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878
|||||| ||||| ||||| |||||||| | |||||| |||| |||| ||| || || ||
Sbjct 2591142 AAATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGAT 2591083
Query 33879 AACAAA 33884
|||||
Sbjct 2591082 GACAAA 2591077
>seq602
Length=1640730
Score = 417 bits (462), Expect = 1e-111
Identities = 656/935 (70%), Gaps = 12/935 (1%)
Strand=Plus/Plus
Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTCCCATT 33012
|||| |||||| |||| || | |||| || | | |||| ||||| || |||||
Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAA-GAGTTGCCCGTTGAACTTGACATCACGCCCATC 122164
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
| | || || || || | || || || |||||||| ||||||||||| || ||
Sbjct 122165 CTCTAATACTCGCCTACTCTCTTA---AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || ||||| ||||| || | ||| ||| | || |||| || ||
Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| ||| ||||| |||||||| | || ||||| | |||||||| || || ||
Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252
|| | ||| | ||| | ||||| || || ||||| || || |||| || ||
Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401
Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312
||| || | | || ||| ||| | | |||||| ||||| || || || |||
Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460
Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372
|| || || || ||||| ||||| ||||||||| | || ||||| || || || |||||
Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520
Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432
| || || || || ||||| |||||||| || || || | ||||||||||||||||||
Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580
Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTT 33489
||||| |||||||| | | | |||||||| ||| |||| ||||| |
Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640
Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549
|||||||| |||||||| |||||||||||||| || || || || || ||||| |
Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700
Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33609
| | || || || ||||| ||||||||||| | ||||| |||||||| || ||
Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760
Query 33610 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 33669
|||||||| ||||| ||||| || || |||||||| | || || |||||||| ||||||
Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820
Query 33670 GTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33729
| ||| || | | |||| ||||||||||||||||| |||||||| || ||||| ||
Sbjct 122821 TGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGCA 122880
Query 33730 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 33789
| ||||| |||||||||| | || || ||| | || | ||| | | ||| ||
Sbjct 122881 AGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCC 122940
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
|| || | || || || || ||||||||||||| ||||| ||||| |||||||| | |
Sbjct 122941 TTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTGC 123000
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
||||| |||| |||| ||| || || || |||||
Sbjct 123001 CAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035
>seq418
Length=2079112
Score = 387 bits (428), Expect = 2e-102
Identities = 667/963 (69%), Gaps = 18/963 (2%)
Strand=Plus/Plus
Query 32933 AACAAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTAT 32989
|| ||||||| ||| || ||| |||| |||||| |||| || | |||| || |
Sbjct 760998 AAAAAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGT 761057
Query 32990 CTTCTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 33045
| |||| ||||| | ||||| | || || || || || | || || || ||
Sbjct 761058 CCG-TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAG 761116
Query 33046 TTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAA 33105
|||||||| ||||||||||| || || ||||| || ||||| ||||| || | ||
Sbjct 761117 TTAGTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAA 761176
Query 33106 AtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTC 33165
| || | || |||| || || | ||| ||||| || ||||| || || |||
Sbjct 761177 ACCTTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTC 761236
Query 33166 ATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 33225
|| | || ||||| || || || || ||||| | ||| | || || || || |||
Sbjct 761237 ATTAAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGT 761296
Query 33226 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 33285
|| || || |||| || || ||| || | | || ||| ||| |
Sbjct 761297 TCTATCCTGACTGCATTGACAATTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACC 761356
Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345
| |||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct 761357 AGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGC 761416
Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405
| || ||||| || || || ||||| | || || || |||||||| |||||||| ||
Sbjct 761417 TTATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCA 761476
Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA-TAAGTCTCTCTCCATA 33464
|| || |||||| ||||||||||||| ||||| |||||| || | | ||||||||
Sbjct 761477 AAAGAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATA 761535
Query 33465 ACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521
||| |||| ||||| |||||||| |||||||| |||||||||||
Sbjct 761536 GGTGGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGG 761595
Query 33522 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33581
||| || || || || || ||||| | | | || || |||||||| |||||
Sbjct 761596 CATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATC 761650
Query 33582 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33641
||| | ||||| |||||||| || || |||||||| ||||| ||||| || || |||||
Sbjct 761651 GATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAA 761710
Query 33642 ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCAC 33701
||| || || || |||||||| |||||| | ||| || ||| | || |||||||||||
Sbjct 761711 ACAGCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCAC 761770
Query 33702 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 33761
||| || |||||||| || || || |||| ||||| |||||||||| | || || ||
Sbjct 761771 TATGCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGG 761830
Query 33762 TGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 33821
| | || | ||| | | ||| || || || | || || || || |||||||||
Sbjct 761831 TTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAG 761890
Query 33822 TGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881
||| ||||| || || |||||||| | ||| || |||| |||| ||| || || || ||
Sbjct 761891 TGAAGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGAC 761950
Query 33882 AAA 33884
|||
Sbjct 761951 AAA 761953
>seq635
Length=1382696
Score = 260 bits (288), Expect = 2e-64
Identities = 345/474 (73%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
|||||||| |||||| | ||| ||| | || | || |||||||||||| || || | |
Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| | |||| ||||| || |||||||| || || ||| || | || || | ||
Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|||||||||| || || |||||||| ||||| || || || || || |||| || |
Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
| || || || | |||||||| | ||| ||||| | | |||| | ||| |||||||
Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383
Query 62235 TTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291
| || ||| |||| ||||||||| | || ||||| || || ||||| ||||||
Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443
Query 62292 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
||||| | | | || || | ||| || | ||| ||||| || | |||||||||||
Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
|| || ||||| |||||||| ||||| |||||||| ||||| | ||||||||||||||
Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62464
|| ||| ||||||||||| ||||| ||||| || || | | |||||| || ||
Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616
>seq339
Length=2552696
Score = 127 bits (140), Expect = 3e-24
Identities = 105/128 (82%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396
|| ||||||||||| || || ||||| |||||||| ||||| |||||||| ||||| |
Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639
Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579
Query 62457 CTATTTCT 62464
|| || ||
Sbjct 2056578 CTGTTCCT 2056571
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271
|| ||||||||||||||||||||| || |||||||| || | || || || |||| |
Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564
Query 63272 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63330
|| || || ||||||||||| || |||||| || |||||| | | || || ||||||
Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505
Query 63331 ACGGTTCCA 63339
| |||||||
Sbjct 2043504 ATGGTTCCA 2043496
Score = 86.0 bits (94), Expect = 8e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634
|||| || || ||||| || || || || |||||||| || || || || || || |
Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176
Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694
||||||||||||| ||||| | ||||| || || || || | || ||||| ||||
Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116
Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754
| | ||||||||| || || || || ||||| || || || || || || | || |
Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056
Query 62755 TCTTATTAGA 62764
||||| ||
Sbjct 2048055 GTTTATTTGA 2048046
>seq92
Length=5367877
Score = 125 bits (138), Expect = 9e-24
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387
|| ||||| || || || || |||||||| |||||||| ||||| ||||| | |||||
Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855
Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446
||||||||||| | |||||| ||||| |||||||| ||||||||||| ||||| |||||
Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796
Score = 87.8 bits (96), Expect = 2e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745
||||||||||||| || ||||| ||||||||||||||||| ||||| | || ||||
Sbjct 3842361 CCAAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAA 3842302
Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776
||||||| || || ||||| || || |||||
Sbjct 3842301 AATATTTCTCATCCGGTGTAAGCTTGTTCCA 3842271
>seq446
Length=2046506
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| |||||||| || || ||||| || || || ||||| || || || || |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| ||||| |||||||| || || || |||||||||||||||||||| ||||| |||||||
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 33446 C 33446
|
Sbjct 492490 C 492490
Score = 102 bits (112), Expect = 1e-16
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623
|||||||| ||||||||||| | ||||| |||||||| || || |||||||| |||||
Sbjct 489518 ATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGC 489459
Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683
||||| || || |||||||| | || || |||||||| |||||| | ||| || ||
Sbjct 489458 AATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTC 489399
Query 33684 CGCC 33687
| ||
Sbjct 489398 CACC 489395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622902012967480
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